scholarly journals Mitochondrial DNA sequences of the Afro-Arabian spiny-tailed lizards (genus Uromastyx; family Agamidae): phylogenetic analyses and evolution of gene arrangements

2005 ◽  
Vol 85 (2) ◽  
pp. 247-260 ◽  
Author(s):  
SAYED A. M. AMER ◽  
YOSHINORI KUMAZAWA
2002 ◽  
Vol 18 (3) ◽  
pp. 577-608 ◽  
Author(s):  
Merel L. Dalebout ◽  
James G. Mead ◽  
C. Scott Baker ◽  
Alan N. Baker ◽  
Anton L. Helden

1988 ◽  
Vol 41 (3) ◽  
pp. 327 ◽  
Author(s):  
S Bennett ◽  
LJ Alexander ◽  
RH Crozier ◽  
AG Mackinlay

Bats (Chiroptera) are divided into the suborders Megachiroptera (fruit bats, 'megabats') and Microchiroptera (predominantly insectivores, 'microbats'). It had been found that megabats and primates share a connection system between the retina and the midbrain not seen in microbats or other eutherian mammals, and challenging but plausible hypotheses were made that (a) bats are diphyletic and (b) megabats are flying primates. We obtained two DNA sequences from the mitochondrion of the fruit bat Pteropus poliocephalus, and performed phylogenetic analyses using the bat sequences in conjunction with homologous Drosophila, mouse, cow and human sequences. Two trees stand out as significantly more likely than any other; neither of these links the bat and human as the closest sequences. These results cast considerable doubt on the hypothesis that megabats are particularly close to primates.


Ornis Svecica ◽  
2017 ◽  
Vol 27 (2–4) ◽  
Author(s):  
Martin Stervander ◽  
Henrik Knudsen ◽  
Henrik Bruun Kristensen

On 27 May 2015, a Green Warbler Phylloscopus nitidus was caught and ringed at Blåvand Bird Observatory, the westernmost point in Denmark. The species is challenging to identify on morphological basis alone, and the bird’s identity was confirmed with phylogenetic analyses of mitochondrial DNA sequences. This constitutes the first record of Green Warbler in Denmark, the third record in Fennoscandia – following records on Öland, Sweden, on 29 May 2003, and Åland, Finland, on 20 May 2012 – and the eighth vagrant record in Europe outside the species’ very restricted peripheral breeding range.


2021 ◽  
Vol 12 ◽  
Author(s):  
Cecilia Soledad Carnovale ◽  
Gabriela Paula Fernández ◽  
Mariano Lisandro Merino ◽  
Matías Sebastián Mora

With about 68 recognized living species, subterranean rodents of the genus Ctenomys are found in a multiplicity of habitats, from the dunes of the Atlantic coast to the Andes Mountains, including environments ranging from humid steppes of Pampas to the dry deserts of Chaco region. However, this genus needs an exhaustive reevaluation of its systematic and phylogenetic relationships regarding the different groups that compose it. This knowledge is essential to propose biodiversity conservation strategies both at species level and at higher hierarchical levels. In order to clarify the taxonomy and the recent evolutionary history from populations of Ctenomys in the Pampas region, Argentina, phylogenetic relationships among them were evaluated using mitochondrial DNA sequences: gene encoding cytochrome b protein (1,140 bp) and the non-coding D-loop region (434 bp). To infer the divergence times inside the Ctenomys clade, a Bayesian calibrate tree using fossil remains data from different families within Caviomorpha was performed at first. Secondly, that calibration data was used as priors in a new Bayesian phylogenetic inference within the genus Ctenomys. This phylogenetic tree emphasized on species currently distributed on the Pampas region, more precisely considering both the talarum and mendocinus groups. Bayesian inferences (BI) were integrated with the results of a Maximum Likelihood approach (ML). Based on these results, the distributional limits of the mendocinus and talarum groups appear to be related to the physiognomy of the Pampas region soils. On the other hand, the validity of C. pundti complex as a differentiated species of C. talarum is debated. According to previous evidence from morphological and chromosomal studies, these results show a very low divergence between those species that originally were classified within the talarum group. Mitochondrial DNA sequences from populations associated with these putative species have not recovered as reciprocal monophyletic groups in the phylogenetic analyses. In conclusion, C. talarum and C. pundti complex might be considered as the same biological species, or lineages going through a recent or incipient differentiation process. The results obtained in this study have important implications for conservation policies and practices, since both species are currently categorized as Vulnerable and Endangered, respectively.


2007 ◽  
Vol 28 (1) ◽  
pp. 1-6 ◽  
Author(s):  
José Brito ◽  
Raquel Vaconcelos ◽  
D. James Harris

AbstractAfrican spiny-tailed lizards (Uromastyx) are large, herbivorous lizards extensively traded locally for food and internationally as pets. Several species have recently been described, although some remain controversial. To determine relationships within North African forms, twenty individuals were analysed for over 1000 bases of mitochondrial DNA sequences. Phylogenetic analyses indicate four deeply divergent lineages that correspond to sampling areas, but not to current species designations. These results indicate that present taxonomy does not reflect the evolutionary history of these species.


Botany ◽  
2014 ◽  
Vol 92 (12) ◽  
pp. 901-910 ◽  
Author(s):  
Joel P. Olfelt ◽  
William A. Freyman

Taxa of Rhodiola L. (Crassulaceae) generally grow in arctic or alpine habitats. Some Rhodiola species are used medicinally, one taxon, Rhodiola integrifolia Raf. subsp. leedyi (Rosend. & J.W.Moore) Moran, (Leedy’s roseroot), is rare and endangered, and the group’s biogeography in North America is intriguing because of distributional disjunctions and the possibility that Rhodiola rhodantha (A.Gray) H.Jacobsen (2n = 7II) and Rhodiola rosea L. (2n = 11II) hybridized to form Rhodiola integrifolia Raf. (2n = 18II). Recent studies of the North American Rhodiola suggest that the group’s current taxonomy is misleading. We analyzed nuclear and chloroplast DNA sequences (internal transcribed spacer (ITS), trnL intron, trnL–trnF spacer, trnS–trnG spacer) from the North American Rhodiola taxa. We combined our data with GenBank sequences from Asian Rhodiola species, performed parsimony, maximum likelihood (ML), and Bayesian phylogenetic analyses, and applied a Bayesian clock model to the ITS data. Our analyses reveal two major Rhodiola clades, suggest that hybridization between R. rhodantha and R. rosea lineages was possible, show two distinct clades within R. integrifolia, and demonstrate that a Black Hills, South Dakota, Rhodiola population should be reclassified as Leedy’s roseroot. We recommend that R. integrifolia be revised, and that the Black Hills Leedy’s roseroot population be managed as part of that rare and endangered taxon.


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