Genome‐wide association study reveals new loci involved in Arabidopsis thaliana and Turnip mosaic virus (Tu MV ) interactions in the field

2018 ◽  
Vol 221 (4) ◽  
pp. 2026-2038 ◽  
Author(s):  
Bernadette Rubio ◽  
Patrick Cosson ◽  
Mélodie Caballero ◽  
Frédéric Revers ◽  
Joy Bergelson ◽  
...  
2014 ◽  
Vol 5 (1) ◽  
Author(s):  
Matthew W. Horton ◽  
Natacha Bodenhausen ◽  
Kathleen Beilsmith ◽  
Dazhe Meng ◽  
Brian D. Muegge ◽  
...  

Nature ◽  
2010 ◽  
Vol 465 (7298) ◽  
pp. 627-631 ◽  
Author(s):  
Susanna Atwell ◽  
Yu S. Huang ◽  
Bjarni J. Vilhjálmsson ◽  
Glenda Willems ◽  
Matthew Horton ◽  
...  

2017 ◽  
Author(s):  
Envel Kerdaffrec ◽  
Magnus Nordborg

AbstractSeed dormancy is a complex adaptive trait that controls the timing of seed germination, one of the major fitness components in many plant species. Despite being highly heritable, seed dormancy is extremely plastic and influenced by a wide range of environmental cues. Here, using a set of 92 Arabidopsis thaliana lines from Sweden, we investigate the effect of seed maturation temperature on dormancy variation at the population level. The response to temperature differs dramatically between lines, demonstrating that genotype and the maternal environment interact in controlling the trait. By performing a genome-wide association study (GWAS), we identified several candidate genes that could account for this plasticity, two of which are involved in the photoinduction of germination. Altogether, our results provide insight into both the molecular mechanisms and the evolution of dormancy plasticity, and can serve to improve our understanding of environmentally dependent life-history transitions.HighlightThe effect of low seed-maturation temperatures on seed dormancy is highly variable in Arabidopsis thaliana accessions from Sweden, denoting strong genotype-environment interactions, and a genome-wide association study identified compelling candidates that could account for this plasticity.


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