TaCER1‐1A is involved in cuticular wax alkane biosynthesis in hexaploid wheat and responds to plant abiotic stresses

2019 ◽  
Vol 42 (11) ◽  
pp. 3077-3091 ◽  
Author(s):  
Tingting Li ◽  
Yulin Sun ◽  
Tianxiang Liu ◽  
Hongqi Wu ◽  
Peipei An ◽  
...  
BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Fengqing Han ◽  
Jingjing Huang ◽  
Qi Xie ◽  
Yumei Liu ◽  
Zhiyuan Fang ◽  
...  

Abstract Background The aerial organs of most terrestrial plants are covered by cuticular waxes, which impart plants a glaucous appearance and play important roles in protecting against various biotic and abiotic stresses. Despite many glossy green (wax-defective) mutants being well characterized in model plants, little is known about the genetic basis of glossy green mutant in broccoli. Results B156 is a spontaneous broccoli mutant showing a glossy green phenotype. Detection by scanning electron microscopy (SEM) and chromatography-mass spectrometry (GC-MS) revealed that B156 is a cuticular wax-defective mutant, lacking waxes mostly longer than C28. Inheritance analysis revealed that this trait was controlled by a single recessive gene, BoGL5. Whole-genome InDel markers were developed, and a segregating F2 population was constructed to map BoGL5. Ultimately, BoGL5 was mapped to a 94.1 kb interval on C01. The BoCER2 gene, which is homologous to the Arabidopsis CER2 gene, was identified as a candidate of BoGL5 from the target interval. Sequence analyses revealed that Bocer2 in B156 harbored a G-to-T SNP mutation at the 485th nucleotide of the CDS, resulting in a W-to-L transition at the 162nd amino acid, a conserved site adjacent to an HXXXD motif of the deduced protein sequence. Expression analysis revealed that BoCER2 was significantly down-regulated in the leaves, stems, and siliques of B156 mutant than that of B3. Last, ectopic expression of BoCER2 in A. thaliana could, whereas Bocer2 could not, rescue the phenotype of cer2 mutant. Conclusions Overall, this study mapped the locus determining glossy phenotype of B156 and proved BoCER2 is functional gene involved in cuticular wax biosynthesis which would promotes the utilization of BoCER2 to enhance plant resistance to biotic and abiotic stresses, and breeding of B. oleracea cultivars with glossy traits.


2011 ◽  
Vol 55 (1) ◽  
pp. 196-200 ◽  
Author(s):  
Z. Y. Fu ◽  
Z. B. Zhang ◽  
Z. H. Liu ◽  
X. J. Hu ◽  
P. Xu

2011 ◽  
Vol 156 (1) ◽  
pp. 29-45 ◽  
Author(s):  
Brice Bourdenx ◽  
Amélie Bernard ◽  
Frédéric Domergue ◽  
Stéphanie Pascal ◽  
Amandine Léger ◽  
...  

Agronomy ◽  
2019 ◽  
Vol 9 (9) ◽  
pp. 527 ◽  
Author(s):  
Song ◽  
Ma ◽  
Yin ◽  
Yang ◽  
He ◽  
...  

Transcription factors (TFs) play fundamental roles in the developmental processes of all living organisms. Squamosa Promoter Binding Protein-like (SBP/SBP-Box) is a major family of plant-specific TFs, which plays important roles in multiple processes involving plant growth and development. While some work has been done, there is a lot more that is yet to be discovered in the hexaploid wheat SBP (TaSBP) family. With the completion of whole genome sequencing, genome-wide analysis of SBPs in common hexaploid wheat is now possible. In this study, we used protein–protein Basic Local Alignment Search Tool (BLASTp) to hunt the newly released reference genome sequence of hexaploid wheat (Chinese spring). Seventy-four TaSBP proteins (belonging to 56 genes) were identified and clustered into five groups. Gene structure and motif analysis indicated that most TaSBPs have relatively conserved exon–intron arrangements and motif composition. Analysis of transcriptional data showed that many TaSBP genes responded to some biological and abiotic stresses with different expression patterns. Moreover, three TaSBP genes were generally expressed in the majority of tissues throughout the wheat growth and also responded to many environmental biotic and abiotic stresses. Collectively, the detailed analyses presented here will help in understanding the roles of the TaSBP and also provide a reference for the further study of its biological function in wheat.


2015 ◽  
Vol 56 (10) ◽  
pp. 1944-1961 ◽  
Author(s):  
Yong Wang ◽  
Meiling Wang ◽  
Yulin Sun ◽  
Daniela Hegebarth ◽  
Tingting Li ◽  
...  

2010 ◽  
Vol 5 (6) ◽  
pp. 765-776 ◽  
Author(s):  
Georgi Bonchev ◽  
Sevdalin Georgiev ◽  
Stephen Pearce

AbstractThe bulk of large plant genomes consists of retrotransposons. Retrotransposons are able to integrate into a multitude of loci in the genome, and can thereby generate insertional polymorphism between individuals, as well as mutations and new characteristics. Retrotransposons are largely quiescent during development, but become more active in response to biotic and abiotic stresses, which cause them to produce larger pools of transcripts. The present study assesses the structural dynamics and putative transcriptional activation of BARE-1 and WIS 2-1A retrotransposons in ethyl methanesulfonate (EMS)-induced hexaploid wheat and Triticale sphaerococcum mutants, via an RT-PCR approach that utilized the retrotransposon based markers SSAP, IRAP and REMAP. Our results demonstrate a polymorphic pattern distribution of BARE-1/WIS 2-1A members, and identify new insertions. The WIS 2-1A retrotransposon members have a modulated transcriptional profile, which strongly suggests that EMS treatment encourages their activation Retrotransposon-based methods are efficient for fingerprinting and genetic polymorphism studies of sphaerococcum mutant forms, and can illuminate the genome dynamics affecting the genes responsible for the sphaerococcum phenotype.


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