scholarly journals Draft Genome Sequences of Eight Obligate Methane Oxidizers Occupying Distinct Niches Based on Their Nitrogen Metabolism: TABLE 1 

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Kim Heylen ◽  
Paul De Vos ◽  
Bram Vekeman
Keyword(s):  
Nitrogen Metabolism ◽  
Nitrogen Assimilation ◽  
Draft Genome ◽  
Terrestrial Ecosystems ◽  
Genome Sequences ◽  
Aerobic Methanotrophs ◽  
Methylomonas Methanica

The genome sequences of Methylomonas methanica (NCIMB 11130 T , R-45363, and R-45371), Methylomonas koyamae (R-45378, R-45383, and R-49807), Methylomonas lenta (R-45370), and Methylosinus sp. (R-45379) were obtained. These aerobic methanotrophs were isolated from terrestrial ecosystems, and their distinct phenotypes related to nitrogen assimilation and dissimilation were previously reported.

scholarly journals Draft Genome Sequences of Two Gammaproteobacterial Methanotrophs Isolated from Rice Ecosystems

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Katharina Frindte ◽  
Marina G. Kalyuzhnaya ◽  
Françoise Bringel ◽  
Peter F. Dunfield ◽  
Mike S. M. Jetten ◽  
...  
Keyword(s):  
Draft Genome ◽  
Rice Paddy ◽  
Genome Sequences ◽  
Content Type ◽  
Rice Plants ◽  
Rice Ecosystems ◽  
Aerobic Methanotrophs

ABSTRACT The genomes of the aerobic methanotrophs “Methyloterricola oryzae” strain 73aT and Methylomagnum ishizawai strain 175 were sequenced. Both strains were isolated from rice plants. Methyloterricola oryzae strain 73aT represents the first isolate of rice paddy cluster I, and strain 175 is the second representative of the recently described genus Methylomagnum.

scholarly journals Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems: TABLE 1 

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
James D. Flynn ◽  
Hisako Hirayama ◽  
Yasuyoshi Sakai ◽  
Peter F. Dunfield ◽  
Martin G. Klotz ◽  
...  
Keyword(s):  
Hydrothermal Vent ◽  
Draft Genome ◽  
Marine Ecosystems ◽  
Genome Sequences ◽  
Aerobic Methanotrophs

The genome sequences ofMethylobacter marinusA45,Methylobactersp. strain BBA5.1, andMethylomarinum vadiIT-4 were obtained. These aerobic methanotrophs are typical members of coastal and hydrothermal vent marine ecosystems.

scholarly journals Complete and Draft Genome Sequences of Aerobic Methanotrophs Isolated from a Riparian Wetland

2021 ◽  
Vol 10 (9) ◽  
Author(s):  
Ohana Yonara de Assis Costa ◽  
Marion Meima-Franke ◽  
Paul L. E. Bodelier
Keyword(s):  
Draft Genome ◽  
Methane Emissions ◽  
Methanotrophic Bacteria ◽  
Genome Sequences ◽  
Riparian Wetland ◽  
Aerobic Methanotrophs

ABSTRACT Wetlands are important sources of methane emissions, and the impacts of these emissions can be mitigated by methanotrophic bacteria. The genomes of methanotrophs Methylomonas sp. strain LL1 and Methylosinus sp. strain H3A, as well as Methylocystis sp. strains H4A, H15, H62, and L43, were sequenced and are reported here.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

scholarly journals Draft Genome Sequences of Four Dickeya dianthicola and Four Dickeya solani Strains

2013 ◽  
Vol 1 (4) ◽  
Author(s):  
L. Pritchard ◽  
S. Humphris ◽  
S. Baeyen ◽  
M. Maes ◽  
J. Van Vaerenbergh ◽  
...  
Keyword(s):  
Draft Genome ◽  
Genome Sequences ◽  
Dickeya Solani

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals Draft Genome Sequences of Four Alteromonas macleodii Strains Isolated from Copper Coupons and Grown Long-Term at Elevated Copper Levels: TABLE 1 

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Kathleen D. Cusick ◽  
Jason R. Dale ◽  
Brenda J. Little ◽  
Justin C. Biffinger
Keyword(s):  
Marine Bacterium ◽  
Draft Genome ◽  
Genome Sequences ◽  
Ship Hulls ◽  
Early Stages ◽  
Antifouling Agent ◽  
Alteromonas Macleodii

Alteromonas macleodii is a marine bacterium involved in the early stages of biofouling on ship hulls treated with copper as an antifouling agent. We report here the draft genome sequences of an A. macleodii strain isolated from copper coupons and three laboratory mutants grown long-term at elevated copper levels.

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

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