scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

scholarly journals Draft Genome Sequences of Chryseobacterium lactis NCTC11390T Isolated from Milk, Chryseobacterium oncorhynchi 701B-08T from Rainbow Trout, and Chryseobacterium viscerum 687B-08T from Diseased Fish

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Jin-Ju Jeong ◽  
Ye Ji Lee ◽  
Duleepa Pathiraja ◽  
Byeonghyeok Park ◽  
In-Geol Choi ◽  
...  
Keyword(s):  
Growth Promotion ◽  
Bacterial Species ◽  
Draft Genome ◽  
Genome Sequences ◽  
Free Living ◽  
Gram Negative ◽  
Content Type ◽  
The Family ◽  
Diseased Fish ◽  
Type Strains

The genus Chryseobacterium, belonging to the family Flavobacteriaceae, contains Gram-negative, yellow-pigmented, rod-shaped, and non-spore-forming bacterial species, which may be free living or parasitic. Here, we report draft genome sequences of type strains of three species of Chryseobacterium containing genes related to biological control and plant growth promotion.

scholarly journals Draft Genome Sequences of Six Flavobacterium psychrophilum Strains Isolated from Dead Juvenile Ayu (Plecoglossus altivelis altivelis) near the Mouth of the Nahari River, Kochi, Japan

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Cold Water ◽  
Draft Genome ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Bacterial Cold Water Disease

Flavobacterium psychrophilum causes bacterial cold-water disease in ayu inhabiting clear rivers in Japan. In this study, we report the draft genome sequences of six F. psychrophilum strains isolated from the gills and skin of dead juvenile ayu near the mouth of the Nahari River.

scholarly journals Draft Genome Sequences of Two Pseudomonas aeruginosa Isolates from the Female Urogenital Tract

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Genevieve Johnson ◽  
Carine R. Mores ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Environmental Conditions ◽  
Draft Genome ◽  
Urogenital Tract ◽  
Negative Bacterium ◽  
Genome Sequences ◽  
Gram Negative ◽  
Content Type

Pseudomonas aeruginosa is a Gram-negative bacterium that has the ability to survive in and readily adapt to a variety of environmental conditions. Here, we report 2 genome sequences of P. aeruginosa strains, UMB1046 and UMB5686, isolated from the female urogenital tract.

scholarly journals Draft Genome Sequences of 42 Environmental Vibrio vulnificus Strains Isolated from the Northern Gulf of Mexico

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Megan M. Mullis ◽  
I-Shuo Huang ◽  
Githzette M. Planas-Costas ◽  
Reavelyn Pray ◽  
Gregory W. Buck ◽  
...  
Keyword(s):  
Gulf Of Mexico ◽  
Necrotizing Fasciitis ◽  
Vibrio Vulnificus ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Negative Bacterium ◽  
Genome Sequences ◽  
Gram Negative ◽  
Content Type ◽  
Northern Gulf Of Mexico

Vibrio vulnificus is a Gram-negative bacterium and an opportunistic pathogen that can cause septicemia or necrotizing fasciitis. Here, we report the draft genome sequences of 42 environmental V. vulnificus strains collected from the northern Gulf of Mexico. These data will allow for more robust comparisons between clinical and environmental strains.

scholarly journals Draft Genome Sequences of Sphingomonas mucosissima DSM 17494 and Sphingomonas dokdonensis DSM 21029

2017 ◽  
Vol 5 (35) ◽  
Author(s):  
Anja Poehlein ◽  
Jan Hendrik Wübbeler ◽  
Rolf Daniel ◽  
Alexander Steinbüchel
Keyword(s):  
Draft Genome ◽  
Strictly Aerobic ◽  
Genome Sequences ◽  
Gram Negative ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Sphingomonas mucosissima and Sphingomonas dokdonensis are Gram-negative chemoheterotrophic strictly aerobic rods or cocci. The genomes (3.453 Mb and 3.587 Mb, respectively) contain 3,279 and 3,329 predicted protein-encoding genes, respectively. The genome of S. dokdonensis harbors a 90-kb plasmid.

scholarly journals Draft Genome Sequences of Two Acidophilic, Mesophilic Verrucomicrobial Methanotrophs Contain Only One pmoCAB Operon

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Geert Cremers ◽  
Arjan Pol ◽  
Mike S. M. Jetten ◽  
Huub J. M. Op den Camp
Keyword(s):  
Draft Genome ◽  
Low Ph ◽  
Soil Samples ◽  
Genome Sequences ◽  
Gram Negative ◽  
Content Type ◽  
Illumina Technology ◽  
Solfatara Crater

Methylacidimicrobium cyclopophantes 3B and Methylacidimicrobium tartarophylax 4AC are Gram-negative rod-shaped mesophilic methanotrophs isolated from soil samples with low pH at the Solfatara Crater, near Naples, Italy. The genomes of these extremophilic verrucomicrobia were sequenced using Illumina technology, and both species possess one pmoCAB operon and two xoxF genes.

scholarly journals Draft Genome Sequences of Aeromonas schubertii Strains Isolated from Asian Seabass from Thailand

2022 ◽  
Author(s):  
Komkiew Pinpimai ◽  
Kitipong Angsujinda ◽  
Tongchai Thitiphuree ◽  
Sirikorn Kitiyodom ◽  
Putita Chokmangmeepisarn ◽  
...  
Keyword(s):  
Rare Species ◽  
Draft Genome ◽  
Mass Mortality ◽  
Genome Sequences ◽  
Aquatic Animals ◽  
Gram Negative ◽  
Content Type ◽  
Asian Seabass ◽  
Central Thailand

Aeromonas schubertii is a Gram-negative, rod-shaped bacterium. It is a rare species that has been reported in humans and aquatic animals. Here, we report the genome sequences of A. schubertii strains isolated from two mass mortality events in central Thailand that were associated with aquaculture of Asian seabass.

scholarly journals Draft Genome Sequence of Riemerella anatipestifer Isolate 17CS0503

2018 ◽  
Vol 6 (20) ◽  
Author(s):  
Anne Busch ◽  
Martin Ryll ◽  
Alexander Immel ◽  
Sabin Kornell ◽  
Ben Krause-Kyora ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Anas Platyrhynchos ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
Riemerella Anatipestifer ◽  
Peking Duck ◽  
The Family

ABSTRACT Riemerella anatipestifer is a Gram-negative bacterium belonging to the family Flavobacteriaceae. It is primarily associated with acute septicemia in younger birds. The R. anatipestifer isolate 17CS0503 described here was isolated from a Peking duck (Anas platyrhynchos domesticus) in Hannover, Germany, in 1999.

scholarly journals Draft Genome Sequences of Obligate Methylotrophs Methylovorus sp. Strain MM2 and Methylobacillus sp. Strain MM3, Isolated from Grassland Soil

2018 ◽  
Vol 7 (8) ◽  
Author(s):  
Michael Christopher Macey ◽  
Jennifer Pratscher ◽  
Andrew Crombie ◽  
J. Colin Murrell
Keyword(s):  
Draft Genome ◽  
Genome Sequences ◽  
Grassland Soil ◽  
Content Type ◽  
The Family

Methylotrophs of the family Methylophilaceae were isolated from grassland soil. Here, we report the draft genome sequences of two obligate methylotrophs, Methylovorus sp.

scholarly journals Draft Genome Sequences of Two Natural Isolates of the Yeast Barnettozyma californica from Ireland, UCD09 and UCD89

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Alisha A. Mullen ◽  
Ciara D. Lynch ◽  
Shannon M. Hill ◽  
Cian P. Holohan ◽  
Tadhg Ó Cróinín ◽  
...  
Keyword(s):  
Single Nucleotide Polymorphism ◽  
Draft Genome ◽  
Snp Analysis ◽  
Nucleotide Polymorphism ◽  
Genome Sequences ◽  
Yeast Genus ◽  
Single Nucleotide ◽  
Content Type ◽  
The Family ◽  
Natural Isolates

ABSTRACT No genome sequence of a species from Barnettozyma, a yeast genus in the family Phaffomycetaceae, is currently available. We isolated two B. californica strains from soils in Ireland and generated draft sequences of their 11.7-Mb genomes. Single nucleotide polymorphism (SNP) analysis showed 20,490 differences between the strains and suggests that B. californica is haploid.

Sign in / Sign up

Export Citation Format

Share Document