scholarly journals Genome Sequence of the Fish Pathogen Flavobacterium columnare Genomovar II Strain 94-081

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Salih Kumru ◽  
Hasan C. Tekedar ◽  
Geoffrey C. Waldbieser ◽  
Attila Karsi ◽  
Mark L. Lawrence
Keyword(s):  
Genome Sequence ◽  
Channel Catfish ◽  
Brackish Water ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Columnaris Disease

Flavobacterium columnare causes columnaris disease in fresh and brackish water worldwide. F. columnare strain 94-081 was isolated from a diseased channel catfish in 1994; its genome sequence is the first completed genomovar II sequence.

scholarly journals Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain CSF-298-10

2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Jason P. Evenhuis ◽  
Scott E. LaPatra ◽  
Joerg Graf
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Columnaris Disease

ABSTRACT We announce here the draft genome assembly of Flavobacterium columnare CSF-298-10, a strain isolated from an outbreak of columnaris disease at a commercial trout farm in Hagerman Valley, Idaho, USA. The complete genome consists of 13 contigs totaling 3,284,579 bp, with an average G+C content of 31.5% and 2,933 predicted coding genes.

scholarly journals Complete Genome Sequence of Fish Pathogen Flavobacterium columnare Strain B185, Originating from Finland

2019 ◽  
Vol 8 (49) ◽  
Author(s):  
Janne J. Ravantti ◽  
Elina Laanto ◽  
Petri Papponen ◽  
Lotta-Riina Sundberg
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Sequencing Technology ◽  
Content Type ◽  
Pacbio Rs Ii ◽  
Circular Genome

We report a complete genome sequence of a Finnish isolate of the fish pathogen Flavobacterium columnare. Using PacBio RS II sequencing technology, the complete circular genome of F. columnare strain B185 with 3,261,404 bp was obtained.

scholarly journals Complete Genome Sequence of the Fish PathogenFlavobacterium columnareStrain C#2

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Ryan P. Bartelme ◽  
Ryan J. Newton ◽  
Yongtao Zhu ◽  
Nan Li ◽  
Benjamin R. LaFrentz ◽  
...  
Keyword(s):  
Freshwater Fish ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Flavobacterium Columnare ◽  
Circular Chromosome ◽  
Gram Negative ◽  
Water Fish ◽  
Columnaris Disease

Flavobacterium columnareis a Gram-negative bacterial pathogen that causes columnaris disease of freshwater fish.Flavobacterium columnarestrain C#2 was isolated from a diseased warm-water fish and is typed as genomovar II. The genome consists of a single 3.33-Mb circular chromosome with 2,689 predicted coding genes.

scholarly journals Genome Sequence of the Fish Pathogen Flavobacterium columnare ATCC 49512

2012 ◽  
Vol 194 (10) ◽  
pp. 2763-2764 ◽  
Author(s):  
H. C. Tekedar ◽  
A. Karsi ◽  
A. F. Gillaspy ◽  
D. W. Dyer ◽  
N. R. Benton ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Flavobacterium Columnare ◽  
Fish Pathogen

scholarly journals Draft Genome Sequences of Flavobacterium columnare Strains ARS1 and BGFS27, Isolated from Channel Catfish (Ictalurus punctatus)

2019 ◽  
Vol 8 (26) ◽  
Author(s):  
Wenlong Cai ◽  
C. R. Arias
Keyword(s):  
Ictalurus Punctatus ◽  
Channel Catfish ◽  
Draft Genome ◽  
Genetic Group ◽  
Flavobacterium Columnare ◽  
Genome Sequences ◽  
Content Type ◽  
Columnaris Disease ◽  
Group 3 ◽  
Group 2

Flavobacterium columnare strain BGFS27 was isolated from an apparently healthy wild channel catfish (Ictalurus punctatus) collected from the Mobile River in 2005. F. columnare strain ARS1 was isolated from a channel catfish suffering from columnaris disease in a commercial farm in 1996. BGFS27 belongs to genomovar II (genetic group 2), while ARS1 belongs to genomovar III (genetic group 3). Here, we report the draft genome sequences of F. columnare BGFS27 and ARS1, obtained by PacBio sequencing.

scholarly journals Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Genomovar III Strain PH-97028 (=CIP 109753)

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
Alexis Criscuolo ◽  
Olivier Chesneau ◽  
Dominique Clermont ◽  
Chantal Bizet
Keyword(s):  
Genome Sequence ◽  
Reference Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Content Type

ABSTRACT Flavobacterium columnare strain PH-97028 (=CIP 109753) is a genomovar III reference strain that was isolated from a diseased Ayu fish in Japan. We report here the analysis of the first available genomovar III sequence of this species to aid in identification, epidemiological tracking, and virulence studies.

scholarly journals Complete Genome Sequence of the Fish Pathogen Flavobacterium columnare Pf1

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Yulei Zhang ◽  
Pin Nie ◽  
Li Lin
Keyword(s):  
Complete Genome ◽  
Virulent Strain ◽  
Etiologic Agent ◽  
Pelteobagrus Fulvidraco ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Yellow Catfish ◽  
Aquaculture Industry ◽  
Columnaris Disease ◽  
Highly Virulent

Flavobacterium columnare is the etiologic agent of columnaris disease, a devastating fish disease prevailing in worldwide aquaculture industry. Here, we describe the complete genome of F. columnare strain Pf1, a highly virulent strain isolated from yellow catfish ( Pelteobagrus fulvidraco ) in China.

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