scholarly journals Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Genomovar III Strain PH-97028 (=CIP 109753)

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
Alexis Criscuolo ◽  
Olivier Chesneau ◽  
Dominique Clermont ◽  
Chantal Bizet
Keyword(s):  
Genome Sequence ◽  
Reference Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Content Type

ABSTRACT Flavobacterium columnare strain PH-97028 (=CIP 109753) is a genomovar III reference strain that was isolated from a diseased Ayu fish in Japan. We report here the analysis of the first available genomovar III sequence of this species to aid in identification, epidemiological tracking, and virulence studies.

scholarly journals Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain CSF-298-10

2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Jason P. Evenhuis ◽  
Scott E. LaPatra ◽  
Joerg Graf
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Flavobacterium Columnare ◽  
Fish Pathogen ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Columnaris Disease

ABSTRACT We announce here the draft genome assembly of Flavobacterium columnare CSF-298-10, a strain isolated from an outbreak of columnaris disease at a commercial trout farm in Hagerman Valley, Idaho, USA. The complete genome consists of 13 contigs totaling 3,284,579 bp, with an average G+C content of 31.5% and 2,933 predicted coding genes.

scholarly journals Draft Genome Sequence of Escherichia coli Phage CMSTMSU, Isolated from Shrimp Farm Effluent Water

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Lelin Chinnadurai ◽  
Thirumalaikumar Eswaramoorthy ◽  
Abinaya Paramachandran ◽  
Sayan Paul ◽  
Rashmi Rathy ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Effluent Water ◽  
Fish Pathogen ◽  
Content Type ◽  
Shrimp Farm ◽  
Escherichia Coli Phage

The Escherichia coli phage CMSTMSU was isolated from shrimp farm effluent water in Ramanathapuram, India. The phage exhibited lytic activity against both E. coli and the fish pathogen Pseudomonas aeruginosa.

scholarly journals Draft Genome Sequence of Fish Pathogen Aeromonas bestiarum GA97-22

2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Salih Kumru ◽  
Hasan C. Tekedar ◽  
Matt J. Griffin ◽  
Geoffrey C. Waldbieser ◽  
Mark R. Liles ◽  
...  
Keyword(s):  
Rainbow Trout ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Fish Pathogen ◽  
Gram Negative ◽  
Content Type ◽  
Skin Ulcers ◽  
Chronic Skin ◽  
Motile Bacterium

ABSTRACT Aeromonas bestiarum is a Gram-negative mesophilic motile bacterium causing acute hemorrhagic septicemia or chronic skin ulcers in fish. Here, we report the draft genome sequence of A. bestiarum strain GA97-22, which was isolated from rainbow trout in 1997. This genome sequence will improve our understanding of the complex taxonomy of motile aeromonads.

scholarly journals Draft Genome Sequence of Yersinia ruckeri Strain FMV-22, Isolated from Diseased Rainbow Trout (Oncorhynchus mykiss) in Peru

2020 ◽  
Vol 9 (3) ◽  
Author(s):  
Fernando Mesías ◽  
Diego Gerpe ◽  
Luis Llanco ◽  
E. Serrano-Martínez ◽  
Jesús L. Romalde
Keyword(s):  
Rainbow Trout ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Yersinia Ruckeri ◽  
Fish Pathogen ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rainbow Trout Oncorhynchus Mykiss

Yersinia ruckeri is a significant and frequent bacterial fish pathogen in Peru. We report the draft genome sequence of strain FMV-22, isolated from a diseased rainbow trout, which consists of 3.84 Mb, with a G+C content of 47.45% and 3,765 protein-coding genes.

scholarly journals Draft Genome Sequence of the Fish Pathogen Vibrio harveyi Strain ZJ0603

2012 ◽  
Vol 194 (23) ◽  
pp. 6644-6645 ◽  
Author(s):  
Yucong Huang ◽  
Jichang Jian ◽  
Yishan Lu ◽  
Shuanghu Cai ◽  
Bei Wang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Aquatic Organisms ◽  
Draft Genome Sequence ◽  
Epinephelus Coioides ◽  
Fish Pathogen ◽  
Content Type

ABSTRACTVibrio harveyiis an important pathogen that causes vibriosis in various aquatic organisms. Here, we announce the draft genome sequence ofV. harveyistrain ZJ0603, which was isolated from diseased Orange-spotted grouper (Epinephelus coioides) in Guangdong, China.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

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