scholarly journals Draft Genome Sequence of Enterohemorrhagic Escherichia coli O157:H7 Strain MC2 Isolated from Cattle in France

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Pauline Auffret ◽  
Audrey Segura ◽  
Yolande Bertin ◽  
Christophe Klopp ◽  
Olivier Bouchez ◽  
...  

ABSTRACT Enterohemorrhagic Escherichia coli (EHEC) with serotype O157:H7 is a major foodborne pathogen. Here, we report the draft genome sequence of EHEC O157:H7 strain MC2 isolated from cattle in France. The assembly contains 5,400,376 bp that encoded 5,914 predicted genes (5,805 protein-encoding genes and 109 RNA genes).

2018 ◽  
Vol 6 (9) ◽  
pp. e01487-17
Author(s):  
Awa Diop ◽  
Khoudia Diop ◽  
Enora Tomei ◽  
Didier Raoult ◽  
Florence Fenollar ◽  
...  

ABSTRACT We report here the draft genome sequence of Ezakiella peruensis strain M6.X2T. The draft genome is 1,672,788 bp long and harbors 1,589 predicted protein-encoding genes, including 26 antibiotic resistance genes with 1 gene encoding vancomycin resistance. The genome also exhibits 1 clustered regularly interspaced short palindromic repeat region and 333 genes acquired by horizontal gene transfer.


2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Tim Böer ◽  
Kerrin Steensen ◽  
Rolf Daniel

ABSTRACT The spore-forming, thermophilic, and obligate anaerobic bacterium Moorella stamsii was isolated from digester sludge. Apart from its ability to use carbon monoxide for growth, M. stamsii harbors several enzymes for the use of different sugars. The draft genome has a size of 3,329 Mb and contains 3,306 predicted protein-encoding genes.


2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Rachel Raths ◽  
Vincent Peta ◽  
Heike Bücking

From farmed corn soil in California, we isolated and sequenced a new member of the genus Massilia, Massilia sp. strain MC02. Massilia sp. MC02 has an assembled draft genome of 5,023,356 bp with a total of 4,790 protein-encoding genes and 3,028 predicted proteins, 47 tRNA genes, and 2 rRNA operons.


2018 ◽  
Vol 6 (15) ◽  
pp. e00255-18
Author(s):  
Gregor Fiedler ◽  
Erik Brinks ◽  
Christina Böhnlein ◽  
Gyu-Sung Cho ◽  
Sabrina Koberg ◽  
...  

ABSTRACT The genome of the intimin (eae)-harboring Escherichia albertii strain MBT-EA1, isolated from lettuce in Germany, was sequenced. Sequence analysis showed the assembled draft genome size to be 4,560,948 bp, containing a predicted total of 4,414 protein-encoding genes, 11 rRNAs, and 82 tRNAs. Furthermore, three plasmid sequences were found.


2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Anja Poehlein ◽  
Eva Hettwer ◽  
Lennart Mohnike ◽  
Rolf Daniel

ABSTRACT Clostridium thermopalmarium is a moderate thermophilic, rod-shaped, and endospore-forming bacterium, which was isolated from palm wine in Senegal. Butyrate is produced from a broad variety of sugar substrates. Here, we present the draft genome sequence of C. thermopalmarium DSM 5974 (2.822 Mb) containing 2,665 predicted protein-encoding genes.


2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Shimaa Ghazal ◽  
Erik Swanson ◽  
Stephen Simpson ◽  
Krystalynne Morris ◽  
Feseha Abebe-Akele ◽  
...  

ABSTRACT Photorhabdus temperata strain Hm is an entomopathogenic bacterium that forms a symbiotic association with Heterorhabditis nematodes. Here, we report a 5.0-Mbp draft genome sequence for P. temperata strain Hm with a G+C content of 44.1% and containing 4,226 candidate protein-encoding genes.


2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Hannes Neubauer ◽  
Philipp Niemeyer ◽  
Rolf Daniel

ABSTRACT Clostridium liquoris is a strictly anaerobic, Gram-positive, nonmotile, spore-forming, rod-shaped bacterium. The major fermentation products from glucose are ethanol and butyrate. C. liquoris was isolated from a 20-year-old liquor fermentation pit. The draft genome sequence consists of a chromosome (2.892 Mb) harboring 2,788 predicted protein-encoding genes.


2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Bo Li ◽  
Erik Brinks ◽  
Charles M. A. P. Franz ◽  
Gyu-Sung Cho

ABSTRACT The draft genome of Staphylococcus fleurettii MBTS-1, isolated from cucumber in northern Germany, was sequenced. Analysis showed that the assembled genome had a size of 2,582,128 bp with a predicted total of 2,491 protein-encoding genes, 9 rRNAs, 5 ncRNAs, and 44 tRNAs. This strain did not contain plasmid DNA.


2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Rica Bremekamp ◽  
Veronika Theresa Lutz ◽  
Lisa Maria Schulz ◽  
Rolf Daniel

ABSTRACT The strictly anaerobic, Gram-positive bacterium Clostridium luticellarii , which has straight or slightly curved rod-shaped cells, polar endospores, and peritrichous flagella, is used for the production of strong aromatic Chinese liquors. C. luticellarii is able to produce butanoic acid. The draft genome sequence consists of 3.757 Mbp, including 3,632 predicted protein-encoding genes.


2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Faten Ghodhbane-Gtari ◽  
Erik Swanson ◽  
Abdellatif Gueddou ◽  
Stephen Simpson ◽  
Krystalynne Morris ◽  
...  

ABSTRACT Frankia sp. strain BMG5.11, which was isolated from Elaeagnus angustifolia nodules, is able to infect other actinorhizal plants, including Elaeagnaceae, Rhamnaceae, Colletieae, Gymnostoma, and Myricaceae. Here, we report the 11.3-Mbp draft genome sequence of Frankia sp. strain BMG5.11, with a G+C content of 69.9% and 9,926 candidate protein-encoding genes.


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