scholarly journals DNA sequence and expression analysis of algP and algQ, components of the multigene system transcriptionally regulating mucoidy in Pseudomonas aeruginosa: algP contains multiple direct repeats.

1990 ◽  
Vol 172 (5) ◽  
pp. 2511-2520 ◽  
Author(s):  
W M Konyecsni ◽  
V Deretic
Yeast ◽  
1985 ◽  
Vol 1 (2) ◽  
pp. 83-138 ◽  
Author(s):  
Stephen A. Parent ◽  
Carol M. Fenimore ◽  
Keith A. Bostian

2017 ◽  
Vol 5 ◽  
Author(s):  
Bárbara Gionco ◽  
Eliandro R. Tavares ◽  
Admilton G. de Oliveira ◽  
Sueli F. Yamada-Ogatta ◽  
Anderson O. do Carmo ◽  
...  

2021 ◽  
Vol 11 (5) ◽  
pp. 12877-12885

Pseudomonas aeruginosa is one of the most common pathogenic bacteria that cause nosocomial infection. Unfortunately, the irrational use of antibiotics has created a surge in P. aeruginosa resistance nowadays. To overcome this situation, new antibacterial compounds are urgently needed. One of the potential sources to obtain such antibacterial compounds is roselle calyx. This research was carried out using two experimental approaches, survival assay and gene expression analysis, to examine the in vivo antibacterial effect of water fraction of roselle calyx (WFR) against Pseudomonas aeruginosa in Drosophila model of infection. Survival assay was used to demonstrate the impact of treatment on the lifespan of the infected host. The measurement of immune-related Dpt mRNA levels by reverse-transcriptase quantitative PCR (RT-qPCR) was used to assess whether immunostimulation is involved in the antibacterial protection of WFR against P. aeruginosa. The result demonstrated that WFR at concentrations of 0.8% and 2% were able to enhance P. aeruginosa-infected flies' survival. Furthermore, gene expression analysis showed the insignificant difference between WFR-treated flies and healthy control flies at all tested concentrations, implying the non-involvement of Imd-Dpt-mediated pathway immunity in the antipseudomonal protection of WFR. Taken together, our data suggested the in vivo antibacterial activity of WFR against P. aeruginosa in the fruit fly model of infection.


2019 ◽  
Vol 294 (5) ◽  
pp. 1095-1105 ◽  
Author(s):  
Ana Carolina de Oliveira Luz ◽  
Julia Mariana Assis da Silva ◽  
Antonio Mauro Rezende ◽  
Maria Paloma Silva de Barros ◽  
Tereza Cristina Leal-Balbino

2010 ◽  
Vol 9 (6) ◽  
pp. 811-817 ◽  
Author(s):  
Zhu Baojian ◽  
Wang Lei ◽  
Liu Chaoliang ◽  
Kajiura Zenta

1983 ◽  
Vol 3 (5) ◽  
pp. 960-964 ◽  
Author(s):  
J D Saffer ◽  
M I Lerman

A potential Z-DNA sequence, (dA-dC)9, has been found to replace the customary A-rich region in the middle of an Alu family member in the African green monkey genome. This Alu, bounded by imperfect direct repeats, also contains an unusual 3' end and may be a member of a large subfamily of such sequences.


1985 ◽  
Vol 5 (5) ◽  
pp. 943-948
Author(s):  
C Bark ◽  
K Hammarström ◽  
G Westin ◽  
U Pettersson

Four loci for human U4 RNA have been characterized by DNA sequence analysis. The results show that all four loci represent pseudogenes, which are flanked by direct repeats. Three of the pseudogenes, designated U4/5, U4/6, and U4/8, have very similar structures; they are all truncated and contain the first 67 to 68 nucleotides of the U4 RNA sequence. Their properties suggest that they were created by integration of truncated cDNA copies of the U4 RNA into new chromosomal sites. An interesting observation was that their flanking regions exhibit sequence homology. A purine-rich 5'-flanking sequence 12 to 13 nucleotides long is almost perfectly conserved in all three loci. Boxes of homology were also found on the 3' side when the U4/6 and U4/8 loci were compared. The U4/4 locus has a slightly different structure; the pseudogene matches the first 79 nucleotides of U4 RNA, but contains a greater number of mutations than the other pseudogenes. Taken together, the results suggest that a frequently occurring type of pseudogene for human U4 was created by a RNA-mediated mechanism and that the integration sites have features in common.


Plasmid ◽  
1994 ◽  
Vol 32 (2) ◽  
pp. 222-227 ◽  
Author(s):  
Carrie R. Valentine ◽  
Mary Jo Heinrich ◽  
Stephanie L. Chissoe ◽  
Bruce A. Roe
Keyword(s):  

1985 ◽  
Vol 5 (5) ◽  
pp. 943-948 ◽  
Author(s):  
C Bark ◽  
K Hammarström ◽  
G Westin ◽  
U Pettersson

Four loci for human U4 RNA have been characterized by DNA sequence analysis. The results show that all four loci represent pseudogenes, which are flanked by direct repeats. Three of the pseudogenes, designated U4/5, U4/6, and U4/8, have very similar structures; they are all truncated and contain the first 67 to 68 nucleotides of the U4 RNA sequence. Their properties suggest that they were created by integration of truncated cDNA copies of the U4 RNA into new chromosomal sites. An interesting observation was that their flanking regions exhibit sequence homology. A purine-rich 5'-flanking sequence 12 to 13 nucleotides long is almost perfectly conserved in all three loci. Boxes of homology were also found on the 3' side when the U4/6 and U4/8 loci were compared. The U4/4 locus has a slightly different structure; the pseudogene matches the first 79 nucleotides of U4 RNA, but contains a greater number of mutations than the other pseudogenes. Taken together, the results suggest that a frequently occurring type of pseudogene for human U4 was created by a RNA-mediated mechanism and that the integration sites have features in common.


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