scholarly journals Complete Genome Sequence of Psychrobacter sp. Strain KH172YL61, Isolated from Deep-Sea Sediments in the Nankai Trough, Japan

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Daniel Evans-Yamamoto ◽  
Nao Takeuchi ◽  
Takahiro Masuda ◽  
Yumi Murai ◽  
Yasuhide Onuma ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Deep Sea ◽  
Complete Genome ◽  
Nankai Trough ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Deep Sea Sediment ◽  
A Genome

Psychrobacter sp. strain KH172YL61 is a Gram-negative bacterium isolated from deep-sea sediment in the Nankai Trough in Japan. Here, we report the complete genome sequence of this strain, which has a genome size of 3.19 Mb, with a G+C content of 44.0%.

scholarly journals Complete Genome Sequence of Bacillus sp. Strain KH172YL63, Isolated from Deep-Sea Sediment

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Yumi Murai ◽  
Takahiro Masuda ◽  
Yasuhide Onuma ◽  
Daniel Evans-Yamamoto ◽  
Nao Takeuchi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Deep Sea ◽  
Complete Genome ◽  
Nankai Trough ◽  
Bacillus Sp ◽  
Positive Bacterium ◽  
Deep Sea Sediment ◽  
Sea Floor ◽  
A Genome

Bacillus sp. strain KH172YL63 is a Gram-positive bacterium isolated from the deep-sea floor surface sediment at 3,308 m below sea level in the Nankai Trough in Japan. Here, we report the complete genome sequence of Bacillus sp. strain KH172YL63, which has a genome size of 4,251,700 bp and a G+C content of 44.8%.

scholarly journals Complete Genome Sequence of the Highly Adhesive Bacterium Acinetobacter sp. Strain Tol 5

2021 ◽  
Vol 10 (35) ◽  
Author(s):  
Masahito Ishikawa ◽  
Katsutoshi Hori
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Environmental Applications ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
A Genome ◽  
Acinetobacter Sp

Acinetobacter sp. strain Tol 5 is a nonpathogenic Gram-negative bacterium with biotechnological and environmental applications. Here, we report the complete genome sequence of Acinetobacter sp. strain Tol 5, which has a genome size of 4,799,506 bp and a G+C content of 38.1%.

scholarly journals Complete Genome Sequence of Halomonas meridiana Strain Slthf1, Isolated from a Deep-Sea Thermal Vent

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Yuka Takahashi ◽  
Haruno Takahashi ◽  
Josephine Galipon ◽  
Kazuharu Arakawa
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Deep Sea ◽  
Complete Genome ◽  
Negative Bacterium ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Halomonas meridiana strain Slthf1 (ATCC BAA-801) is a Gram-negative bacterium that was isolated from a thermal vent in 1998. Here, we report the complete genome sequence of this strain, which has a 3.6-Mbp genome, containing 3,400 protein-coding sequences.

scholarly journals Complete Genome Sequence of Halomonas hydrothermalis Strain Slthf2, a Halophilic Bacterium Isolated from a Deep-Sea Hydrothermal-Vent Environment

2020 ◽  
Vol 9 (15) ◽  
Author(s):  
Naota Takeyama ◽  
Muyang Huang ◽  
Kensuke Sato ◽  
Josephine Galipon ◽  
Kazuharu Arakawa
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Deep Sea ◽  
Complete Genome ◽  
Gc Content ◽  
Halophilic Bacterium ◽  
Negative Bacterium ◽  
Content Type ◽  
South Pacific Ocean ◽  
A Genome

Halomonas hydrothermalis strain Slthf2 is a Gram-negative bacterium isolated from low-temperature hydrothermal fluids in South Pacific Ocean vent fields located at 2,580-m depth. Here, we report the complete genome sequence of this strain, which has a genome size of 4.12 Mb, with a GC content of 53.2%.

scholarly journals Complete Genome Sequence of Pseudomonas sp. Strain phDV1, an Isolate Capable of Efficient Degradation of Aromatic Hydrocarbons

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Hao Xie ◽  
Giannis Valsamidis ◽  
Eirini Mathioudaki ◽  
Georgios Tsiotis
Keyword(s):  
Genome Sequence ◽  
Aromatic Hydrocarbons ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pseudomonas Sp ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type

Pseudomonas sp. strain phDV1 is a Gram-negative bacterium capable of degrading aromatic hydrocarbons. Here, we present the complete genome sequence of this strain, which consists of 4,727,682 bp, with a 62.3% G+C content and 4,574 genes.

scholarly journals Complete Genome Sequence of Klebsiella pneumoniae Strain TK421, a Conjugative Hypervirulent Isolate

2020 ◽  
Vol 9 (3) ◽  
Author(s):  
Travis J. Kochan ◽  
Egon A. Ozer ◽  
Nathan B. Pincus ◽  
Margaret A. Fitzpatrick ◽  
Alan R. Hauser
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Nosocomial Infections ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Multidrug Resistant ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
Rapid Dissemination

Klebsiella pneumoniae is a Gram-negative bacterium that is a major cause of nosocomial infections worldwide. Here, we present the complete genome sequence of TK421, a clinical bacteremia isolate containing a hypervirulence plasmid carrying tra-associated conjugation machinery genes. Emergence of conjugative hypervirulence plasmids could portend rapid dissemination of hypervirulence among multidrug-resistant K. pneumoniae strains.

scholarly journals Complete Genome Sequence of Altererythrobacter sp. Strain B11, an Aromatic Monomer-Degrading Bacterium, Isolated from Deep-Sea Sediment under the Seabed off Kashima, Japan

2018 ◽  
Vol 6 (12) ◽  
Author(s):  
Allyn H. Maeda ◽  
Shinro Nishi ◽  
Shun'ichi Ishii ◽  
Yasuhiro Shimane ◽  
Hideki Kobayashi ◽  
...  
Keyword(s):  
Nucleotide Sequence ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Deep Sea ◽  
Complete Nucleotide Sequence ◽  
Complete Genome ◽  
Content Type ◽  
Deep Sea Sediment ◽  
Degrading Bacterium ◽  
Aromatic Monomer

ABSTRACT Altererythrobacter sp. strain B11 is an aromatic monomer-degrading bacterium newly isolated from sediment under the seabed off Kashima, Japan, at a depth of 2,100 m. Here, we report the complete nucleotide sequence of the genome of strain B11.

scholarly journals Complete Genome Sequence of Rhizobium japonicum Podophage Pasto

2021 ◽  
Vol 10 (3) ◽  
Author(s):  
Nikhil Manuel ◽  
Leika Rushing ◽  
Aravind Ravindran ◽  
Heather Newkirk ◽  
Ben Burrowes ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Rhizobium Japonicum ◽  
Negative Bacterium ◽  
Significant Similarity ◽  
Gram Negative ◽  
Content Type

ABSTRACT Rhizobium japonicum is a Gram-negative bacterium of interest for research into nitrogen fixation in legumes. This article describes the isolation, sequencing, and annotation of R. japonicum podophage Pasto. While it shows no significant similarity to identified phages, genomic analysis indicates that Pasto may be temperate and is a novel T7-like podophage.

scholarly journals Complete Genome Sequence of Escherichia coli Siphophage Snoke

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
James E. Corban ◽  
Jacob Gramer ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Negative Bacterium ◽  
Protein Coding ◽  
Gram Negative ◽  
Content Type ◽  
E Coli ◽  
Protein Coding Genes

Escherichia coli is a Gram-negative bacterium often found in animal intestinal tracts. Here, we present the genome of the Guernseyvirinae-like E. coli 4s siphophage Snoke. The 44.4-kb genome contains 81 protein-coding genes, for which 33 functions were predicted. The capsid morphogenesis gene in Snoke contains a large intein.

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