scholarly journals Draft Genome Sequence of Fusarium oxysporum f. sp. albedinis Strain Foa 133, the Causal Agent of Bayoud Disease on Date Palm

2020 ◽  
Vol 9 (29) ◽  
Author(s):  
Slimane Khayi ◽  
Siham Khoulassa ◽  
Fatima Gaboun ◽  
Rabha Abdelwahd ◽  
Ghizlane Diria ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Date Palm ◽  
Draft Genome ◽  
Gc Content ◽  
Causal Agent ◽  
Vascular Wilt ◽  
Content Type ◽  
Bayoud Disease

ABSTRACT Fusarium oxysporum f. sp. albedinis is the causal agent of vascular wilt of date palm. Here, we report the genome assembly of the Foa 133 strain, which consists of 3,325 contigs with a total length of 56,228,901 bp, a GC content of 47.42%, an N50 value of 131,587 bp, and 3,684 predicted genes.

scholarly journals High-Quality Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Strain 160527, a Causal Agent of Panama Disease

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Shuta Asai ◽  
Yu Ayukawa ◽  
Pamela Gan ◽  
Sachiko Masuda ◽  
Ken Komatsu ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Causal Agent ◽  
High Quality ◽  
Panama Disease ◽  
Content Type ◽  
High Quality Genome

Fusarium oxysporum f. sp. cubense is the causal agent of banana Fusarium wilt, also known as Panama disease. Here, we present a high-quality genome sequence of F. oxysporum f. sp. cubense strain 160527. The genome assembly is composed of 12 contigs with a total assembly length of 51,139,495 bp (N 50 contig length, 4,884,632 bp).

scholarly journals Draft Genome Sequence of FGL03-6, a Race 1 Strain of Fusarium oxysporum f. sp. conglutinans, the Causal Agent of Cabbage Fusarium Wilt

2018 ◽  
Vol 6 (16) ◽  
pp. e00191-18 ◽  
Author(s):  
Honghao Lv ◽  
Yuhong Yang ◽  
Xing Liu ◽  
Jian Ling ◽  
Zhiyuan Fang ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Causal Agent ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Race 1

ABSTRACT We present here the draft genome sequence of FGL03-6, a race 1 strain of Fusarium oxysporum f. sp. conglutinans, the pathogen causing Fusarium yellows of cabbage. The FGL03-6 genome consists of 414 scaffolds with 61,662,789 bp (GC content, 47.9%) and 9,790 predicted genes.

scholarly journals Draft Genome Sequence and De Novo Assembly of a Fusarium oxysporum f. sp. lycopersici Isolate Collected from the Andean Region in Colombia

2022 ◽  
Author(s):  
Pei-Ling Yu ◽  
James C. Fulton ◽  
Sandra L. Carmona ◽  
Diana Burbano-David ◽  
Luz Stella Barrero ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Genome Assembly ◽  
De Novo Assembly ◽  
De Novo ◽  
Draft Genome ◽  
Vascular Wilt ◽  
Andean Region ◽  
Content Type ◽  
Draft Genome Assembly

We report a draft genome assembly of the causal agent of tomato vascular wilt, Fusarium oxysporum f. sp. lycopersici isolate 59, obtained from the Andean region in Colombia.

scholarly journals Draft Genome Sequence of a Sporulating and Motile Strain of Lachnotalea glycerini Isolated from Water in Québec City, Canada

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Andrée F. Maheux ◽  
Dominique K. Boudreau ◽  
Ève Bérubé ◽  
Maurice Boissinot ◽  
Frédéric Raymond ◽  
...  
Keyword(s):  
Water Sample ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Quebec City ◽  
Content Type

ABSTRACT Lachnotalea glycerini CCRI-19302 belongs to the genus Lachnotalea. The strain was isolated from a water sample harvested in Québec City, Canada. The genome assembly comprised 4,694,231 bp, with 34.6% GC content. This is the first documentation to report the genome sequence of a sporulating and motile strain of L. glycerini.

scholarly journals Draft Genome Sequence of an Isolate of Fusarium oxysporum f. sp. melongenae, the Causal Agent of Fusarium Wilt of Eggplant

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Zhangyong Dong ◽  
Tom Hsiang ◽  
Mei Luo ◽  
Meimei Xiang
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Draft Genome ◽  
Causal Agent ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Final Assembly

ABSTRACT Here, we present the genome sequence of an isolate (14004) of Fusarium oxysporum f. sp. melongenae, an eggplant pathogen. The final assembly consists of 1,631 scaffolds with 53,986,354 bp (G+C content, 46.4%) and 16,485 predicted genes.

scholarly journals Genome Sequence of a California Isolate of Fusarium oxysporum f. sp. lycopersici Race 3, a Fungus Causing Wilt Disease on Tomato

2019 ◽  
Vol 8 (15) ◽  
Author(s):  
Peter M. Henry ◽  
Michelle Stueven ◽  
Sampson Li ◽  
Eugene M. Miyao ◽  
Thomas R. Gordon ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Assembly ◽  
Draft Genome ◽  
Gc Content ◽  
Wilt Disease ◽  
Read Coverage ◽  
High Quality ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Important Disease

Fusarium wilt of tomato, caused by the soilborne fungus Fusarium oxysporum f. sp. lycopersici, is an increasingly important disease of tomato. This paper reports the high-quality draft genome assembly of F. oxysporum f. sp. lycopersici isolate D11 (race 3), which consists of 39 scaffolds with 57,281,978 bp (GC content, 47.5%), an N 50 of 4,408,267 bp, a mean read coverage of 99.8×, and 17,682 predicted genes.

scholarly journals Genome Sequence of Pseudomonas sp. Strain LAP_36, A Rhizosphere Bacterium Isolated from King George Island, Antarctica

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Sarah Mederos da Silveira ◽  
Sheila da Silva ◽  
Andrew Macrae ◽  
Rommel T. J. Ramos ◽  
Fabrício A. Araújo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
South Shetland Islands ◽  
Deschampsia Antarctica ◽  
King George Island ◽  
Protein Coding ◽  
Content Type ◽  
Shetland Islands ◽  
Rhizosphere Bacterium

Pseudomonas sp. strain LAP_36 was isolated from rhizosphere soil from Deschampsia antarctica on King George Island, South Shetland Islands, Antarctica. Here, we report on its draft genome sequence, which consists of 8,794,771 bp with 60.0% GC content and 8,011 protein-coding genes.

scholarly journals Draft Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas pseudoalcaligenes KB-10

2021 ◽  
Vol 10 (20) ◽  
Author(s):  
M. M. A. Khan ◽  
Jin Duan ◽  
Bernard R. Glick ◽  
Patrick M. Finnegan ◽  
Saleh A. Kabli ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Circular Chromosome ◽  
Pseudomonas Pseudoalcaligenes ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

ABSTRACT Pseudomonas pseudoalcaligenes KB-10 can enhance salinity tolerance in coriander plants. We report a draft genome sequence of P. pseudoalcaligenes KB-10, comprising a 5,241,174-bp circular chromosome containing 4,921 genes, with a GC content of 62.97%.

scholarly journals Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Huy Quang Nguyen ◽  
Nguyen Thi-Hanh Vu ◽  
Ha Hoang Chu ◽  
Son Ky Chu ◽  
Ha Hoang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

scholarly journals Metagenome-Assembled Genome Sequence of Aphanizomenon flos-aquae Strain Clear-A1, Assembled from an Enrichment Culture

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Tiffany Yemenian ◽  
Kyra M. Florea ◽  
J. Cameron Thrash ◽  
Eric A. Webb
Keyword(s):  
Genome Sequence ◽  
Algal Bloom ◽  
Enrichment Culture ◽  
Harmful Algal Bloom ◽  
Draft Genome ◽  
Gc Content ◽  
Content Type ◽  
Cyanobacterial Species

ABSTRACT Aphanizomenon flos-aquae is a significant harmful algal bloom-forming cyanobacterial species. Here, we report the draft genome for a strain of A. flos-aquae (Clear-A1) from a harmful algal bloom enrichment culture. This metagenome-assembled genome (MAG) sequence comprises 4,452,466 bp in 60 contigs with a GC content of 37.1%.

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