scholarly journals Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained from a South African Patient with Coronavirus Disease 2019

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Mushal Allam ◽  
Arshad Ismail ◽  
Zamantungwa T. H. Khumalo ◽  
Stanford Kwenda ◽  
Peter van Heusden ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Severe Acute Respiratory Syndrome ◽  
South African ◽  
Genome Sequencing ◽  
African Patient ◽  
South African Patient

ABSTRACT As a contribution to the global efforts to track and trace the ongoing coronavirus pandemic, here we present the sequence, phylogenetic analysis, and modeling of nonsynonymous mutations for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome that was detected in a South African patient with coronavirus disease 2019 (COVID-19).

scholarly journals Complete Coding Sequence of a Case of Chikungunya Virus Imported into Australia

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Bixing Huang ◽  
Alyssa T. Pyke ◽  
Jamie McMahon ◽  
David Warrilow
Keyword(s):  
Phylogenetic Analysis ◽  
Virus Infection ◽  
Real Time ◽  
South African ◽  
Genome Sequencing ◽  
Reverse Transcription ◽  
Chikungunya Virus ◽  
East Central ◽  
Reverse Transcription Pcr ◽  
Central South

ABSTRACT A case of chikungunya virus infection was imported from India into Australia in late 2016. Infection was diagnosed by real-time reverse transcription-PCR and confirmed by culture isolation and genome sequencing. Phylogenetic analysis of the genome sequence indicated that the virus grouped with the east/central/south African genotype.

scholarly journals Identification of a novel WAS mutation in a South African patient presenting with atypical Wiskott-Aldrich syndrome: a case report

2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Brigitte Glanzmann ◽  
Marlo Möller ◽  
Mardelle Schoeman ◽  
Michael Urban ◽  
Paul D. van Helden ◽  
...  
Keyword(s):  
Case Report ◽  
South African ◽  
Wiskott Aldrich Syndrome ◽  
African Patient ◽  
South African Patient

Overrepresentation of the founder PPOX gene mutation R59W in a South African patient with severe clinical manifestation of porphyria

2005 ◽  
Vol 14 (1) ◽  
pp. 50-55 ◽  
Author(s):  
J. Nico P. de Villiers ◽  
Maritha J. Kotze ◽  
Carel J. van Heerden ◽  
Annalene Sadie ◽  
Helena F. J. Gardner ◽  
...  
Keyword(s):  
South African ◽  
Gene Mutation ◽  
Clinical Manifestation ◽  
African Patient ◽  
South African Patient
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