scholarly journals Erratum to: “Self-assembling catalytic systems based on new amphiphile containing purine fragment, exhibiting substrate specificity in hydrolysis of phosphorus acids esters”

2017 ◽  
Vol 87 (7) ◽  
pp. 1649-1649
Author(s):  
D. A. Samarkina ◽  
D. R. Gabdrakhmanov ◽  
V. E. Semenov ◽  
F. G. Valeeva ◽  
L. M. Gubaidullina ◽  
...  
2016 ◽  
Vol 86 (3) ◽  
pp. 656-660 ◽  
Author(s):  
D. A. Samarkina ◽  
D. R. Gabdrakhmanov ◽  
V. E. Semenov ◽  
F. G. Valeeva ◽  
L. M. Gubaidullina ◽  
...  

Author(s):  
V. S. Boltovsky

Prospects for the development of hydrolysis production are determined by the relevance of industrial use of plant biomass to replace the declining reserves of fossil organic raw materials and increasing demand for ethanol, especially for its use as automobile fuel, protein-containing feed additives that compensate for protein deficiency in feed production, and other products. Based on the review of the research results presented in the scientific literature, the analysis of modern methods of liquid-phase acid hydrolysis of cellulose and various types of plant raw materials, including those that differ from traditional ones, is performed. The main directions of increasing its efficiency through the use of new catalytic systems and process conditions are identified. It is shown that the most promising methods for obtaining monosaccharides in hydrolytic processing of cellulose and microcrystalline cellulose, pentosan-containing agricultural waste and wood, are methods for carrying out the process at elevated and supercritical temperatures (high-temperature hydrolysis), the use of new types of solid-acid catalysts and ionic liquids. 


2004 ◽  
Vol 279 (50) ◽  
pp. 52150-52159 ◽  
Author(s):  
Zhonghui Huang ◽  
Bo Zhou ◽  
Zhong-Yin Zhang

The extracellular signal-regulated protein kinase 2 (ERK2) plays a central role in cellular proliferation and differentiation. Full activation of ERK2 requires dual phosphorylation of Thr183and Tyr185in the activation loop. Tyr185dephosphorylation by the hematopoietic protein-tyrosine phosphatase (HePTP) represents an important mechanism for down-regulating ERK2 activity. The bisphosphorylated ERK2 is a highly efficient substrate for HePTP with akcat/Kmof 2.6 × 106m–1s–1. In contrast, thekcatK/mvalues for the HePTP-catalyzed hydrolysis of Tyr(P) peptides are 3 orders of magnitude lower. To gain insight into the molecular basis for HePTP substrate specificity, we analyzed the effects of altering structural features unique to HePTP on the HePTP-catalyzed hydrolysis ofp-nitrophenyl phosphate, Tyr(P) peptides, and its physiological substrate ERK2. Our results suggest that substrate specificity is conferred upon HePTP by both negative and positive selections. To avoid nonspecific tyrosine dephosphorylation, HePTP employs Thr106in the substrate recognition loop as a key negative determinant to restrain its protein-tyrosine phosphatase activity. The extremely high efficiency and fidelity of ERK2 dephosphorylation by HePTP is achieved by a bipartite protein-protein interaction mechanism, in which docking interactions between the kinase interaction motif in HePTP and the common docking site in ERK2 promote the HePTP-catalyzed ERK2 dephosphorylation (∼20-fold increase inkcat/Km) by increasing the local substrate concentration, and second site interactions between the HePTP catalytic site and the ERK2 substrate-binding region enhance catalysis (∼20-fold increase inkcat/Km) by organizing the catalytic residues with respect to Tyr(P)185for optimal phosphoryl transfer.


Catalysts ◽  
2020 ◽  
Vol 10 (4) ◽  
pp. 444 ◽  
Author(s):  
Magdalena Modelska ◽  
Michal J. Binczarski ◽  
Zbigniew Kaminski ◽  
Stanislaw Karski ◽  
Beata Kolesinska ◽  
...  

Catalytic systems based on bimetallic Pd-Au particles deposited on SiO2 were prepared by ultrasonically assisted water impregnation and used in the hydrogenation of furfural obtained by the acidic hydrolysis of waste biomass (brewery’s spent grain) in aqueous phase. Pd-Au/SiO2 catalysts containing 50 g of Pd and 2–100 g of Au per 1 kg of catalyst were characterized by high activity in the studied process and, depending on the Pd/Au ratio, selectivity to 2-methyloxolan-2-ol. The modification of 5%Pd/SiO2 by Au leads to the formation of dispersed Au-Pd solid solution phases, which was confirmed by XRD, XPS, ToF-SIMS, SEM-EDS, and H2-TPR techniques. The effect of dilution of surface palladium by gold atoms is probably crucial for modification of the reaction mechanism and formation of 2-methyloxolan-2-ol as the main product.


Biochemistry ◽  
1996 ◽  
Vol 35 (29) ◽  
pp. 9375-9384 ◽  
Author(s):  
Joseph Rogers ◽  
Bao-Zhu Yu ◽  
Spyros V. Serves ◽  
Gerasimos M. Tsivgoulis ◽  
Demetrios N. Sotiropoulos ◽  
...  

2011 ◽  
Vol 343-344 ◽  
pp. 1222-1228 ◽  
Author(s):  
Su Hong Li ◽  
Min Peng Zhu ◽  
Tuo Ping Li

Galactose is found in many oligosaccharides, galactomannans, glycoproteins and glycolipids, which are widely distributed in plants microorganisms and animals. α-Galactosidase (α-Gal) catalyzes the hydrolysis of 1,6-linked α-galactosyl residues and transgalactosylation. α-Gals are classified into four glycoside hydrolases families (GH): 4, 27, 36 and 57. The majority of known α-Gals belongs to GH families 27 and 36.α-Gals are of particular interest in view of their biotechnological applications.


1997 ◽  
Vol 272 (23) ◽  
pp. 14769-14775 ◽  
Author(s):  
Evgenia V. Pindel ◽  
Natalia Y. Kedishvili ◽  
Trent L. Abraham ◽  
Monica R. Brzezinski ◽  
Jing Zhang ◽  
...  

2020 ◽  
Vol 295 (52) ◽  
pp. 18239-18255
Author(s):  
Victoria Soeung ◽  
Shuo Lu ◽  
Liya Hu ◽  
Allison Judge ◽  
Banumathi Sankaran ◽  
...  

Lys234 is one of the residues present in class A β-lactamases that is under selective pressure due to antibiotic use. Located adjacent to proton shuttle residue Ser130, it is suggested to play a role in proton transfer during catalysis of the antibiotics. The mechanism underpinning how substitutions in this position modulate inhibitor efficiency and substrate specificity leading to drug resistance is unclear. The K234R substitution identified in several inhibitor-resistant β-lactamase variants is associated with decreased potency of the inhibitor clavulanic acid, which is used in combination with amoxicillin to overcome β-lactamase–mediated antibiotic resistance. Here we show that for CTX-M-14 β-lactamase, whereas Lys234 is required for hydrolysis of cephalosporins such as cefotaxime, either lysine or arginine is sufficient for hydrolysis of ampicillin. Further, by determining the acylation and deacylation rates for cefotaxime hydrolysis, we show that both rates are fast, and neither is rate-limiting. The K234R substitution causes a 1500-fold decrease in the cefotaxime acylation rate but a 5-fold increase in kcat for ampicillin, suggesting that the K234R enzyme is a good penicillinase but a poor cephalosporinase due to slow acylation. Structural results suggest that the slow acylation by the K234R enzyme is due to a conformational change in Ser130, and this change also leads to decreased inhibition potency of clavulanic acid. Because other inhibitor resistance mutations also act through changes at Ser130 and such changes drastically reduce cephalosporin but not penicillin hydrolysis, we suggest that clavulanic acid paired with an oxyimino-cephalosporin rather than penicillin would impede the evolution of resistance.


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