scholarly journals FRACTAL CHARACTERIZATIONS OF MAX STATISTICAL DISTRIBUTION IN GENETIC ASSOCIATION STUDIES

2009 ◽  
Vol 12 (04n05) ◽  
pp. 513-531 ◽  
Author(s):  
WENTIAN LI ◽  
YANING YANG

Two noninteger parameters are defined for MAX statistics, which are maxima of d simpler test statistics. The first parameter, d MAX , is the fractional number of tests, representing the equivalent numbers of independent tests in MAX. If the d tests are dependent, d MAX < d. The second parameter is the fractional degrees of freedom k of the chi-square distribution [Formula: see text] that fits the MAX null distribution. These two parameters, d MAX and k, can be independently defined, and k can be noninteger even if d MAX is an integer. We illustrate these two parameters using the examples of MAX2 and MAX3 statistics in genetic case-control studies. We speculate that k is related to the amount of ambiguity of the model inferred by the test. In the case-control genetic association, tests with low k (e.g. k = 1) are able to provide definitive information about the disease model, as versus tests with high k (e.g. k = 2) that are completely uncertain about the disease model. Similar to Heisenberg's uncertain principle, the ability to infer disease model and the ability to detect significant association may not be simultaneously optimized, and k seems to measure the level of their balance.

2002 ◽  
Vol 3 (2) ◽  
pp. 146-153 ◽  
Author(s):  
Cathryn M. Lewis

Abstract This paper provides a review of the design and analysis of genetic association studies. In case control studies, the different contingency tables and their relationships to the underlying genetic model are defined. Population stratification is discussed, with suggested methods to identify and correct for the effect. The transmission disequilibrium test is provided as an alternative family-based test, which is robust to population stratification. The relative benefits of each analysis are summarised.


animal ◽  
2017 ◽  
Vol 11 (4) ◽  
pp. 574-579 ◽  
Author(s):  
S. Biffani ◽  
M. Del Corvo ◽  
R. Capoferri ◽  
A. Pedretti ◽  
M. Luini ◽  
...  

2016 ◽  
Vol 35 (23) ◽  
pp. 4226-4237 ◽  
Author(s):  
Chuanhua Xing ◽  
Janice M. McCarthy ◽  
Josée Dupuis ◽  
L. Adrienne Cupples ◽  
James B. Meigs ◽  
...  

2008 ◽  
Vol 27 (24) ◽  
pp. 5054-5075 ◽  
Author(s):  
Gang Zheng ◽  
Mark Meyer ◽  
Wentian Li ◽  
Yaning Yang

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