scholarly journals In silico evaluation and exploration of antibiotic tuberculosis treatment regimens

2015 ◽  
Vol 9 (1) ◽  
Author(s):  
Elsje Pienaar ◽  
Véronique Dartois ◽  
Jennifer J. Linderman ◽  
Denise E. Kirschner
Author(s):  
Bichismita Sahu ◽  
Santosh Kumar Behera ◽  
Rudradip Das ◽  
Tanay Dalvi ◽  
Arnab Chowdhury ◽  
...  

Introduction: The outburst of the novel coronavirus COVID-19, at the end of December 2019 has turned itself into a pandemic taking a heavy toll on human lives. The causal agent being SARS-CoV-2, a member of the long-known Coronaviridae family, is a positive sense single-stranded enveloped virus and quite closely related to SARS-CoV. It has become the need of the hour to understand the pathophysiology of this disease, so that drugs, vaccines, treatment regimens and plausible therapeutic agents can be produced. Methods: In this regard, recent studies uncovered the fact that the viral genome of SARS-CoV-2 encodes nonstructural proteins like RNA dependent RNA polymerase (RdRp) which is an important tool for its transcription and replication process. A large number of nucleic acid based anti-viral drugs are being repurposed for treating COVID-19 targeting RdRp. Few of them are in the advanced stage of clinical trials including Remdesivir. While performing close investigation of the large set of nucleic acid based drugs, we were surprised to find that the synthetic nucleic acid backbone is explored very little or rare. Results: We have designed scaffolds derived from peptide nucleic acid (PNA) and subjected them for in-silico screening systematically. These designed molecules have demonstrated excellent binding towards RdRp. Compound 12 was found to possess similar binding affinity as Remdesivir with comparable pharmacokinetics. However, the in-silico toxicity prediction indicates compound 12 may be a superior molecule which can be explored further due to its excellent safety-profile with LD50 (12,000mg/kg) as opposed to Remdesivir (LD50 =1000mg/kg). Conclusion: Compound 12 falls in the safe category of class 6. Synthetic feasibility, equipotent binding and very low toxicity of this peptide nucleic acid derived compounds can serve as a leading scaffold to design, synthesize and evaluate many of similar compounds for the treatment of COVID-19.


2015 ◽  
Vol 3 (3) ◽  
pp. 220-234 ◽  
Author(s):  
Alimuddin Zumla ◽  
Jeremiah Chakaya ◽  
Rosella Centis ◽  
Lia D'Ambrosio ◽  
Peter Mwaba ◽  
...  

2016 ◽  
Vol 60 (5) ◽  
pp. 2864-2869 ◽  
Author(s):  
Rosemary V. Swanson ◽  
Nicole C. Ammerman ◽  
Bongani Ngcobo ◽  
John Adamson ◽  
Chivonne Moodley ◽  
...  

ABSTRACTExperimental and clinical studies have indicated that the antileprosy drug clofazimine may contribute treatment-shortening activity when included in tuberculosis treatment regimens. Clofazimine accumulates to high levels in tissues, has a long half-life, and remains in the body for months after administration is stopped. We hypothesized that in tuberculosis treatment, accumulated clofazimine may contribute sustained antimicrobial activity after treatment cessation, and we used the BALB/c mouse model of chronic tuberculosis chemotherapy to address this hypothesis.Mycobacterium tuberculosis-infected mice were treated for 4 weeks or 8 weeks with either isoniazid alone, clofazimine alone, the first-line regimen rifampin-isoniazid-pyrazinamide-ethambutol, or a first-line regimen where clofazimine was administered in place of ethambutol. To evaluate posttreatment antimicrobial activity, bacterial regrowth in the lungs and spleens was assessed at the day of treatment cessation and 2, 4, 6, and 8 weeks after treatment was stopped. Bacterial regrowth was delayed in all mice receiving clofazimine, either alone or in combination, compared to the mice that did not receive clofazimine. This effect was especially evident in mice receiving multidrug therapy. In mice not receiving clofazimine, bacterial regrowth began almost immediately after treatment was stopped, while in mice receiving clofazimine, bacterial regrowth was delayed for up to 6 weeks, with the duration of sustained antimicrobial activity being positively associated with the time that serum clofazimine levels remained at or above the 0.25-μg/ml MIC forM. tuberculosis. Thus, sustained activity of clofazimine may be important in the treatment-shortening effect associated with this drug.


PLoS Medicine ◽  
2008 ◽  
Vol 5 (8) ◽  
pp. e176 ◽  
Author(s):  
William J Burman ◽  
Mark F Cotton ◽  
Diana M Gibb ◽  
A. Sarah Walker ◽  
Andrew A Vernon ◽  
...  

PLoS ONE ◽  
2017 ◽  
Vol 12 (8) ◽  
pp. e0182815
Author(s):  
Natalia Blanco ◽  
Betsy Foxman ◽  
Anurag N. Malani ◽  
Min Zhang ◽  
Seth Walk ◽  
...  

Author(s):  
A. Heena Kauser ◽  
T. Saranya ◽  
Robin George ◽  
E. Sunil Kumar

Photosensitivity reactions due to pyrazinamide are rare. In this report, a case of pyrazinamide induced photodermatitis has been reported in a patient who is one anti-tuberculosis treatment. The patient developed rashes with burning sensation which are worsened on exposure to sun. These rashes had developed since 5 days following 15 days of start of anti-tubercular drugs. Thus these kinds of adverse reactions can be prevented on early detection and reporting these can help in decrease the morbidity rate of tuberculosis with use of pyrazinamide in the treatment regimens.


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