Lipid–protein electrostatic interactions in the regulation of membrane–protein activities

2018 ◽  
pp. 197-216
Author(s):  
Natalia Wilke ◽  
María B. Decca ◽  
Guillermo G. Montich
2021 ◽  
Author(s):  
Gerard Duart ◽  
John Lamb ◽  
Arne Elofsson ◽  
Ismael Mingarro

ABSTRACTSalt bridges between negatively (D, E) and positively charged (K, R, H) amino acids play an important role in protein stabilization. This has a more prevalent effect in membrane proteins where polar amino acids are exposed to a very hydrophobic environment. In transmembrane (TM) helices the presence of charged residues can hinder the insertion of the helices into the membrane. This can sometimes be avoided by TM region rearrangements after insertion, but it is also possible that the formation of salt bridges could decrease the cost of membrane integration. However, the presence of intra-helical salt bridges in TM domains and their effect on insertion has not been properly studied yet. In this work, we use an analytical pipeline to study the prevalence of charged pairs of amino acid residues in TM α-helices, which shows that potentially salt-bridge forming pairs are statistically over-represented. We then selected some candidates to experimentally determine the contribution of these electrostatic interactions to the translocon-assisted membrane insertion process. Using both in vitro and in vivo systems, we confirm the presence of intra-helical salt bridges in TM segments during biogenesis and determined that they contribute between 0.5-0.7 kcal/mol to the apparent free energy of membrane insertion (ΔGapp). Our observations suggest that salt bridge interactions can be stabilized during translocon-mediated insertion and thus could be relevant to consider for the future development of membrane protein prediction software.


Biochemistry ◽  
2002 ◽  
Vol 41 (20) ◽  
pp. 6483-6494 ◽  
Author(s):  
E. T. Johnson ◽  
W. W. Parson

2009 ◽  
Vol 20 (23) ◽  
pp. 4910-4919 ◽  
Author(s):  
Dumaine Williams ◽  
Jérome Vicôgne ◽  
Irina Zaitseva ◽  
Stuart McLaughlin ◽  
Jeffrey E. Pessin

The juxtamembrane domain of vesicle-associated membrane protein (VAMP) 2 (also known as synaptobrevin2) contains a conserved cluster of basic/hydrophobic residues that may play an important role in membrane fusion. Our measurements on peptides corresponding to this domain determine the electrostatic and hydrophobic energies by which this domain of VAMP2 could bind to the adjacent lipid bilayer in an insulin granule or other transport vesicle. Mutation of residues within the juxtamembrane domain that reduce the VAMP2 net positive charge, and thus its interaction with membranes, inhibits secretion of insulin granules in β cells. Increasing salt concentration in permeabilized cells, which reduces electrostatic interactions, also results in an inhibition of insulin secretion. Similarly, amphipathic weak bases (e.g., sphingosine) that reverse the negative electrostatic surface potential of a bilayer reverse membrane binding of the positively charged juxtamembrane domain of a reconstituted VAMP2 protein and inhibit membrane fusion. We propose a model in which the positively charged VAMP and syntaxin juxtamembrane regions facilitate fusion by bridging the negatively charged vesicle and plasma membrane leaflets.


Author(s):  
N. N. Smirnova ◽  
I. A. Nebukina

Membranes are a science intensive product of interindustry use, without which a breakthrough development of basic and high-technology sectors of economy, development of science as well as effective solution of important goals of the social sphere and problems of environment protections are impossible. Active development of medicine, pharmaceutical industry and biotechnology in the recent years contributed to the growth of scientific and commercial interest in ultrafiltration. The most important characteristic of ultrafiltration membranes is selectivity. According to existing views the basis of the separation mechanism implemented in ultrafiltration is size selectivity. However, such phenomena as concentration polarization and adsorption play a very important role in separation. Investigation of these phenomena is of significant practical interest, because its results in many ways determine the choice of the membrane media, conditions of its recovery, the mode and conditions of filtration. Adsorption of proteins on the surface of porous membranes is a rather complicated process due to the individual mechanism implemented in each specific case. Therefore, the issue of the contribution of various types of interactions into the process of adsorption still remains controversial. To determine the nature of membrane/protein interaction and clarify the factors of its control, the present work involved investigation of sorption of several proteins on a number of synthesized porous membranes based on aromatic polyamides noted for the presence, nature and concentration of ionogenic groups. The investigations were carried out using bovine serum albumin, lysozyme of hen's eggs, myoglobin and bacitracin. Adsorption of proteins by the membranes was investigated in the static mode. The protein concentration was determined using the SF-2000 spectrophotometer  (experimental-design bureau Spektr) by optical density at the wave length λ=278 nm. To mathematically process the experimental data, the two-parameter models by Langmuir, Freundlich, Temkin and the three-parameter model by Langmuir-Freundlich were used. To assess the compliance degree of the experimental data to the selected mathematical models, the values of the coefficient of determination (R2) and sum squares errors (SSE) were used. It has been shown that in the case of the presence of charge in protein macromolecules and the membrane surface the role of electrostatic forces is dominant in the protein adsorption mechanism, however, the contribution of non-electrostatic interactions in the investigated membrane/protein systems is significant.


2016 ◽  
Vol 110 (6) ◽  
pp. 1367-1378 ◽  
Author(s):  
Hanif M. Khan ◽  
Tao He ◽  
Edvin Fuglebakk ◽  
Cédric Grauffel ◽  
Boqian Yang ◽  
...  

Author(s):  
Brigid R. Heywood ◽  
S. Champ

Recent work on the crystallisation of inorganic crystals under compressed monomolecular surfactant films has shown that two dimensional templates can be used to promote the oriented nucleation of solids. When a suitable long alkyl chain surfactant is cast on the crystallisation media a monodispersied population of crystals forms exclusively at the monolayer/solution interface. Each crystal is aligned with a specific crystallographic axis perpendicular to the plane of the monolayer suggesting that nucleation is facilitated by recognition events between the nascent inorganic solid and the organic template.For example, monolayers of the long alkyl chain surfactant, stearic acid will promote the oriented nucleation of the calcium carbonate polymorph, calcite, on the (100) face, whereas compressed monolayers of n-eicosyl sulphate will induce calcite nucleation on the (001) face, (Figure 1 & 2). An extensive program of research has confirmed the general principle that molecular recognition events at the interface (including electrostatic interactions, geometric homology, stereochemical complementarity) can be used to promote the crystal engineering process.


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