Thermodynamic Phase Stabilities of Nanocarbon

2010 ◽  
pp. 383-394
Keyword(s):  
2021 ◽  
pp. 168461
Author(s):  
Kartheek Hegde ◽  
Naveena Kumara A. ◽  
Ahmed Rizwan C.L. ◽  
Md Sabir Ali ◽  
Ajith K.M.

2007 ◽  
Vol 52 (5) ◽  
pp. 1872-1880 ◽  
Author(s):  
Urszula Domańska ◽  
Zuzanna Żołek-Tryznowska ◽  
Marek Królikowski

2009 ◽  
Vol 131 (7) ◽  
Author(s):  
Vincent K. Shen ◽  
Jason K. Cheung ◽  
Jeffrey R. Errington ◽  
Thomas M. Truskett

Proteins aggregate and precipitate from high concentration solutions in a wide variety of problems of natural and technological interest. Consequently, there is a broad interest in developing new ways to model the thermodynamic and kinetic aspects of protein stability in these crowded cellular or solution environments. We use a coarse-grained modeling approach to study the effects of different crowding agents on the conformational equilibria of proteins and the thermodynamic phase behavior of their solutions. At low to moderate protein concentrations, we find that crowding species can either stabilize or destabilize the native state, depending on the strength of their attractive interaction with the proteins. At high protein concentrations, crowders tend to stabilize the native state due to excluded volume effects, irrespective of the strength of the crowder-protein attraction. Crowding agents reduce the tendency of protein solutions to undergo a liquid-liquid phase separation driven by strong protein-protein attractions. The aforementioned equilibrium trends represent, to our knowledge, the first simulation predictions for how the properties of crowding species impact the global thermodynamic stability of proteins and their solutions.


2008 ◽  
Vol 43 (11) ◽  
pp. 3149-3154 ◽  
Author(s):  
S. Li ◽  
Z.H. Jiang ◽  
Q. Jiang

2012 ◽  
Vol 117 (D9) ◽  
pp. n/a-n/a ◽  
Author(s):  
Anning Cheng ◽  
Kuan-Man Xu ◽  
Yongxiang Hu ◽  
Seiji Kato

Calphad ◽  
1994 ◽  
Vol 18 (4) ◽  
pp. 387-396 ◽  
Author(s):  
D.O. López ◽  
J. Van Braak ◽  
J.L.L. Tamarit ◽  
H.A.J. Oonk

2021 ◽  
Vol 119 (1) ◽  
pp. e2111046118
Author(s):  
Sadra Bakhshandeh ◽  
Carsten Werner ◽  
Peter Fratzl ◽  
Amaia Cipitria

Dormancy is an evolutionarily conserved protective mechanism widely observed in nature. A pathological example is found during cancer metastasis, where cancer cells disseminate from the primary tumor, home to secondary organs, and enter a growth-arrested state, which could last for decades. Recent studies have pointed toward the microenvironment being heavily involved in inducing, preserving, or ceasing this dormant state, with a strong focus on identifying specific molecular mechanisms and signaling pathways. Increasing evidence now suggests the existence of an interplay between intracellular as well as extracellular biochemical and mechanical cues in guiding such processes. Despite the inherent complexities associated with dormancy, proliferation, and growth of cancer cells and tumor tissues, viewing these phenomena from a physical perspective allows for a more global description, independent from many details of the systems. Building on the analogies between tissues and fluids and thermodynamic phase separation concepts, we classify a number of proposed mechanisms in terms of a thermodynamic metastability of the tumor with respect to growth. This can be governed by interaction with the microenvironment in the form of adherence (wetting) to a substrate or by mechanical confinement of the surrounding extracellular matrix. By drawing parallels with clinical and experimental data, we advance the notion that the local energy minima, or metastable states, emerging in the tissue droplet growth kinetics can be associated with a dormant state. Despite its simplicity, the provided framework captures several aspects associated with cancer dormancy and tumor growth.


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