scholarly journals Phylogeography and population structure of the Dall's porpoise, Phocoenoides dalli, in Japanese waters revealed by mitochondrial DNA

2003 ◽  
Vol 78 (1) ◽  
pp. 81-91 ◽  
Author(s):  
Azusa Hayano ◽  
Masao Amano ◽  
Nobuyuki Miyazaki
Zoosymposia ◽  
2019 ◽  
Vol 15 (1) ◽  
pp. 129-140
Author(s):  
DAVIN H.E. SETIAMARGA ◽  
RENA SHIBA ◽  
YUKI KAMITO ◽  
MASAKI YAMAMOTO ◽  
NAZIFA NAZIHA BT. RAZALI ◽  
...  

Our recent morphological studies on the echinoderm collection of the National Museum of Nature and Science, Tokyo (NMST), indicated that the goniasterid starfishes Ceramaster japonicus (Sladen, 1889) and Ceramaster patagonicus (Sladen, 1889) are distributed in the Pacific Oceanside of Japan. In this study, we studied the NMST samples of C. japonicus and C. patagonicus from Japan, by using two mitochondrial DNA genes, the COI and 12S-rRNA, as markers to test relationships between these species in Japan. C. patagonicus sequences from GenBank were mined and included in the analyses. Results of phylogenetic and haplotype network analyses of both genes (final sequence lengths: COI = 317 bp, 12S = 477 bp) suggested that "Ceramaster patagonicus" and "Ceramaster japonicus" from Japanese waters are almost certainly synonymous without any population structure inside Japan.


ZooKeys ◽  
2021 ◽  
Vol 1055 ◽  
pp. 135-148
Author(s):  
Dongqi Liu ◽  
Feng Lan ◽  
Sicai Xie ◽  
Yi Diao ◽  
Yi Zheng ◽  
...  

To investigate the genetic effects on the population of Coreius guichenoti of dam constructions in the upper reaches of the Yangtze River, we analyzed the genetic diversity and population structure of 12 populations collected in 2009 and 2019 using mitochondrial DNA (mtDNA) control regions. There was no significant difference in genetic diversity between 2009 and 2019 (P > 0.05), but the population structure tended to become stronger. Genetic differentiation (FST) among five populations (LX, BB, YB, SF and JA) collected in 2009 was not significant (P > 0.05). However, some populations collected in 2019 were significantly differentiated (P < 0.05), indicating that the population structure has undergone change. A correlation analysis showed that the genetic diversity of the seven populations collected in 2019 was significantly negatively correlated with geographical height (r = −0.808, P = 0.028), indicating that the populations at high elevations were more vulnerable than those at low elevations. In order to prevent the further decrease of genetic diversity and population resources, some conservation and restoration suggestions, such as fish passage and artificial breeding, are put forward.


2020 ◽  
Vol 19 (1) ◽  
pp. 1275-1288
Author(s):  
Nkosinathi Nxumalo ◽  
Simone Ceccobelli ◽  
Irene Cardinali ◽  
Hovirag Lancioni ◽  
Emiliano Lasagna ◽  
...  

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