fish passage
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2022 ◽  
Vol 8 ◽  
Author(s):  
Vishnu Kandimalla ◽  
Matt Richard ◽  
Frank Smith ◽  
Jean Quirion ◽  
Luis Torgo ◽  
...  

The Ocean Aware project, led by Innovasea and funded through Canada's Ocean Supercluster, is developing a fish passage observation platform to monitor fish without the use of traditional tags. This will provide an alternative to standard tracking technology, such as acoustic telemetry fish tracking, which are often not appropriate for tracking at-risk fish species protected by legislation. Rather, the observation platform uses a combination of sensors including acoustic devices, visual and active sonar, and optical cameras. This will enable more in-depth scientific research and better support regulatory monitoring of at-risk fish species in fish passages or marine energy sites. Analysis of this data will require a robust and accurate method to automatically detect fish, count fish, and classify them by species in real-time using both sonar and optical cameras. To meet this need, we developed and tested an automated real-time deep learning framework combining state of the art convolutional neural networks and Kalman filters. First, we showed that an adaptation of the widely used YOLO machine learning model can accurately detect and classify eight species of fish from a public high resolution DIDSON imaging sonar dataset captured from the Ocqueoc River in Michigan, USA. Although there has been extensive research in the literature identifying particular fish such as eel vs. non-eel and seal vs. fish, to our knowledge this is the first successful application of deep learning for classifying multiple fish species with high resolution imaging sonar. Second, we integrated the Norfair object tracking framework to track and count fish using a public video dataset captured by optical cameras from the Wells Dam fish ladder on the Columbia River in Washington State, USA. Our results demonstrate that deep learning models can indeed be used to detect, classify species, and track fish using both high resolution imaging sonar and underwater video from a fish ladder. This work is a first step toward developing a fully implemented system which can accurately detect, classify and generate insights about fish in a wide variety of fish passage environments and conditions with data collected from multiple types of sensors.


Author(s):  
Claire E. Snyder ◽  
Devon C. Oliver ◽  
Brent C. Knights ◽  
Stephen M. Pescitelli ◽  
Gregory W. Whitledge

Fishes ◽  
2021 ◽  
Vol 6 (4) ◽  
pp. 81
Author(s):  
Francisco Javier Sanz-Ronda ◽  
Francisco Javier Bravo-Córdoba ◽  
Ana García-Vega ◽  
Jorge Valbuena-Castro ◽  
Andrés Martínez-de-Azagra ◽  
...  

The monitoring of river discharge is vital for the correct management of water resources. Flat-V gauging weirs are facilities used worldwide for measuring discharge. These structures consist of a small weir with a triangular cross-section and a flat “V”-shaped notch. Their extensive use is a consequence of their utility in the measurement of both low and high flow conditions. However, depending on their size, local morphology and river discharge can act as full or partial hydraulic barriers to fish migration. To address this concern, the present work studies fish passage performance over flat-V weirs considering their hydraulic performance. For this, radio-tracking and video-monitoring observations were combined with computational fluid dynamics (CFD) models in two flat-V weirs, using Iberian barbel (Luciobarbus bocagei) as the target species. Results showed that fish passage is conditioned by both hydraulic and behavioral processes, providing evidence for scenarios in which flat-V weirs may act as full or partial barriers to upstream movements. For the studied flat-V weirs, a discharge range of 0.27–8 m3/s, with a water drop difference between upstream and downstream water levels lower than 0.7 m and a depth downstream of the weir of higher than 0.3 m can be considered an effective passage situation for barbels. These findings are of interest for quantifying flat-V weir impacts, for engineering applications and for establishing managing or retrofitting actions when required.


2021 ◽  
Vol 9 ◽  
Author(s):  
Jeffrey J. Duda ◽  
Christian E. Torgersen ◽  
Samuel J. Brenkman ◽  
Roger J. Peters ◽  
Kathryn T. Sutton ◽  
...  

The removal of two large dams on the Elwha River was completed in 2014 with a goal of restoring anadromous salmonid populations. Using observations from ongoing field studies, we compiled a timeline of migratory fish passage upstream of each dam. We also used spatially continuous snorkeling surveys in consecutive years before (2007, 2008) and after (2018, 2019) dam removal during summer baseflow to assess changes in fish distribution and density over 65 km of the mainstem Elwha River. Before dam removal, anadromous fishes were limited to the 7.9 km section of river downstream of Elwha Dam, potamodromous species could not migrate throughout the river system, and resident trout were the most abundant species. After dam removal, there was rapid passage into areas upstream of Elwha Dam, with 8 anadromous species (Chinook, Coho, Sockeye, Pink, Chum, Winter Steelhead, Summer Steelhead, Pacific Lamprey, and Bull Trout) observed within 2.5 years. All of these runs except Chum Salmon were also observed in upper Elwha upstream of Glines Canyon Dam within 5 years. The spatial extent of fish passage by adult Chinook Salmon and Summer Steelhead increased by 50 km and 60 km, respectively, after dam removal. Adult Chinook Salmon densities in some previously inaccessible reaches in the middle section of the river exceeded the highest densities observed in the lower section of the river prior to dam removal. The large number (>100) of adult Summer Steelhead in the upper river after dam removal was notable because it was among the rarest anadromous species in the Elwha River prior to dam removal. The spatial extent of trout and Bull Trout remained unchanged after dam removal, but their total abundance increased and their highest densities shifted from the lower 25 km of the river to the upper 40 km. Our results show that reconnecting the Elwha River through dam removal provided fish access to portions of the watershed that had been blocked for nearly a century.


Author(s):  
Francisco Javier Sanz-Ronda ◽  
Francisco Javier Bravo-Córdoba ◽  
Ana García-Vega ◽  
Jorge Valbuena-Castro ◽  
Andrés Manuel Martínez-de-Azagra ◽  
...  

The monitoring of river discharge is vital for the correct management of water resources. A worldwide facility used for measuring discharge are flat-V gauging weirs. These structures consist of a small weir, with a triangular cross-section and a flat “V”-shaped notch. Their extensive use is a consequence of their utility in the measurement of both low and high flow conditions. However, depending on their size, local morphology and river discharge can act as full or partial hydraulic barriers to fish migration. To give answer to this question, the present work studies fish passage performance over flat-V weirs considering their hydraulic performance. For this, radio-tracking and video monitoring observations were combined with computational fluid dynamics (CFD) models in two flat-V weirs, using Iberian barbel (Luciobarbus bocagei) as target species. Results show that fish passage is conditioned by both hydraulic and behavioral processes, providing evidences about the scenarios where flat-V weirs may act as full or partial barriers to upstream movements. For the studied flat-V weirs, a discharge range of 0.27-8 m3/s, with a water drop difference between upstream and downstream water levels lower than 0.7 m and a depth downstream the weir higher than 0.30 m can be considered as an effective passage situation for barbels. These findings are of interest to quantify flat-V weir impacts, for engineering applications and to establish managing or retrofitting actions when required.


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