scholarly journals A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in Caenorhabditis elegans

PLoS Genetics ◽  
2011 ◽  
Vol 7 (6) ◽  
pp. e1002109 ◽  
Author(s):  
Richard J. Poole ◽  
Enkelejda Bashllari ◽  
Luisa Cochella ◽  
Eileen B. Flowers ◽  
Oliver Hobert
PLoS Genetics ◽  
2011 ◽  
Vol 7 (3) ◽  
pp. e1002010 ◽  
Author(s):  
Matthew D. Nelson ◽  
Elinor Zhou ◽  
Karin Kiontke ◽  
Hélène Fradin ◽  
Grayson Maldonado ◽  
...  

Author(s):  
Simon Haeussler ◽  
Assa Yeroslaviz ◽  
Stéphane G Rolland ◽  
Sebastian Luehr ◽  
Eric J Lambie ◽  
...  

Abstract Mitochondrial dynamics plays an important role in mitochondrial quality control and the adaptation of metabolic activity in response to environmental changes. The disruption of mitochondrial dynamics has detrimental consequences for mitochondrial and cellular homeostasis and leads to the activation of the mitochondrial unfolded protein response (UPRmt), a quality control mechanism that adjusts cellular metabolism and restores homeostasis. To identify genes involved in the induction of UPRmt in response to a block in mitochondrial fusion, we performed a genome-wide RNAi screen in Caenorhabditis elegans mutants lacking the gene fzo-1, which encodes the ortholog of mammalian Mitofusin, and identified 299 suppressors and 86 enhancers. Approximately 90% of these 385 genes are conserved in humans, and one third of the conserved genes have been implicated in human disease. Furthermore, many have roles in developmental processes, which suggests that mitochondrial function and the response to stress are defined during development and maintained throughout life. Our dataset primarily contains mitochondrial enhancers and non-mitochondrial suppressors of UPRmt, indicating that the maintenance of mitochondrial homeostasis has evolved as a critical cellular function, which, when disrupted, can be compensated for by many different cellular processes. Analysis of the subsets ‘non-mitochondrial enhancers’ and ‘mitochondrial suppressors’ suggests that organellar contact sites, especially between the ER and mitochondria, are of importance for mitochondrial homeostasis. In addition, we identified several genes involved in IP3 signaling that modulate UPRmt in fzo-1 mutants and found a potential link between pre-mRNA splicing and UPRmt activation.


2020 ◽  
Author(s):  
Simon Haeussler ◽  
Assa Yeroslaviz ◽  
Stéphane G. Rolland ◽  
Sebastian Luehr ◽  
Barbara Conradt

ABSTRACTThe disruption of mitochondrial dynamics has detrimental consequences for mitochondrial and cellular homeostasis and leads to the activation of the mitochondrial unfolded protein response (UPRmt), a quality control mechanism that adjusts cellular metabolism and restores homeostasis. To identify genes involved in the induction of UPRmt in response to a block in mitochondrial fusion, we performed a genome-wide RNAi screen in Caenorhabditis elegans mutants lacking the gene fzo-1, which encodes the ortholog of mammalian Mitofusin. We find that approximately 90% of the 299 suppressors and 86 enhancers identified are conserved in humans and that one third of the conserved genes have been implicated in human disease. Furthermore, many of the 385 genes have roles in developmental processes, which suggests that mitochondrial function and the response to stress are defined during development and maintained throughout life. In addition, we find that enhancers are predominantly ‘mitochondrial’ genes and suppressors ‘non-mitochondrial’ genes, which indicates that the maintenance of mitochondrial homeostasis has evolved as a critical cellular function that when disrupted can be compensated for by a variety of cellular processes. Our analysis of ‘non-mitochondrial’ enhancers and ‘mitochondrial’ suppressors suggests that organellar contact sites, especially between ER and mitochondria, are of importance for mitochondrial homeostasis. Finally, we uncovered several genes involved in IP3 signaling that modulate UPRmt in fzo-1 mutants, found a potential link between pre-mRNA splicing and UPRmt activation and identified the Miga-1/2 ortholog K01D12.6 as required for mitochondrial dynamics in C. elegans.


2014 ◽  
Vol 226 (03) ◽  
Author(s):  
F Ponthan ◽  
D Pal ◽  
J Vormoor ◽  
O Heidenreich
Keyword(s):  

2011 ◽  
Vol 195 (6) ◽  
pp. i9-i9 ◽  
Author(s):  
Bart A. Westerman ◽  
A. Koen Braat ◽  
Nicole Taub ◽  
Marko Potman ◽  
Joseph H.A. Vissers ◽  
...  

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