scholarly journals Molecular and functional characterization of cionin receptors in the ascidian, Ciona intestinalis: the evolutionary origin of the vertebrate cholecystokinin/gastrin family

2012 ◽  
Vol 213 (1) ◽  
pp. 99-106 ◽  
Author(s):  
Toshio Sekiguchi ◽  
Michio Ogasawara ◽  
Honoo Satake

Cholecystokinin (CCK) and gastrin are vertebrate brain–gut peptides featured by a sulfated tyrosine residue and a C-terminally amidated tetrapeptide consensus sequence. Cionin, identified in the ascidian, Ciona intestinalis, the closest species to vertebrates, harbors two sulfated tyrosines and the CCK/gastrin consensus tetrapeptide sequence. While a putative cionin receptor, cior, was cloned, the ligand–receptor relationship between cionin and CioR remains unidentified. Here, we identify two cionin receptors, CioR1 and CioR2, which are the aforementioned putative cionin receptor and its novel paralog respectively. Phylogenetic analysis revealed that CioRs are homologous to vertebrate CCK receptors (CCKRs) and diverged from a common ancestor in the Ciona-specific lineage. Cionin activates intracellular calcium mobilization in cultured cells expressing CioR1 or CioR2. Monosulfated and nonsulfated cionin exhibited less potent or no activity, indicating that CioRs possess pharmacological features similar to the vertebrate CCK-specific receptor CCK1R, rather than its subtype CCK2R, given that a sulfated tyrosine in CCK is required for binding to CCK1R, but not to CCK2R. Collectively, the present data reveal that CioRs share a common ancestor with vertebrate CCKRs and indicate that CCK and CCK1R form the ancestral ligand–receptor pair in the vertebrate CCK/gastrin system. Cionin is expressed in the neural complex, digestive organs, oral siphon and atrial siphons, whereas the expression of ciors was detected mainly in these tissues and the ovary. Furthermore, cioninergic neurons innervate both of the siphons. These results suggest that cionin is involved in the regulation of siphonal functions.

2000 ◽  
Vol 258 (2) ◽  
pp. 352-360 ◽  
Author(s):  
Anthony J. Dicker ◽  
Magdalena M. Serewko ◽  
Alison L. Dahler ◽  
Kum Kum Khanna ◽  
Pritinder Kaur ◽  
...  

2007 ◽  
Vol 44 (1-3) ◽  
pp. 238-239
Author(s):  
Georgia Sfyroera ◽  
Daniel Melillo ◽  
Rosaria De Santis ◽  
R. Graziano ◽  
Rita Marino ◽  
...  

2020 ◽  
Author(s):  
Abhinandan Mani Tripathi ◽  
Arie Fridrich ◽  
Magda Lewandowska ◽  
Yehu Moran

ABSTRACTWhile the biogenesis of microRNAs (miRNAs) in both animals and plants depends on Dicer, a conserved RNAse III enzyme, its helping partner proteins are considered distinct for each kingdom. Nevertheless, recent discovery of homologs of Hyponastic Leaves1 (HYL1), a “plant-specific” Dicer partner, in the metazoan phylum Cnidaria challenges the view that miRNAs evolved convergently in animals and plants. Here we show that the HYL1 homolog Hyl1-like a (Hyl1La) is crucial for proper development and miRNA biogenesis in the cnidarian model Nematostella vectensis. Inhibition of Hyl1La resulted in arresting of metamorphosis in Nematostella embryos. Moreover, most miRNAs are significantly downregulated in Hyl1La knockdown animals. These results support the participation of cnidarian HYL1 homologs in miRNA biogenesis and points towards the function of this pathway in cnidarian development. Further, it suggests that the last common ancestor of animals and plants carried a HYL1 homolog that took essential part in miRNA biogenesis.


2021 ◽  
Author(s):  
Nicol Mecozzi ◽  
Arianna Nenci ◽  
Olga Vera ◽  
Aimee Falzone ◽  
Gina M DeNicola ◽  
...  

Circular RNAs (circRNAs) are a class of non-coding RNAs that feature a covalently closed ring structure formed through backsplicing. circRNAs are broadly expressed and contribute to biological processes through a variety of functions. Standard gain-of-function and loss-of-function approaches to study gene functions have significant limitations when studying circRNAs. Overexpression studies in particular suffer from the lack of efficient genetic tools. While mammalian expression plasmids enable transient overexpression of circRNAs in cultured cells, most cell biological studies require long-term ectopic expression. Here we report the development and characterization of genetic tools enabling stable circRNA overexpression in vitro and in vivo. We demonstrated that circRNA expression constructs can be delivered to cultured cells via transposons, whereas lentiviral vectors have limited utility for the delivery of circRNA constructs. We further showed that circRNA transposons can be supplied to mouse livers via hydrodynamic tail vein injection, resulting in ectopic circRNA expression in a hepatocellular carcinoma mouse model. Furthermore, we generated genetically engineered mice harboring circRNA expression constructs. We demonstrate that this approach enables constitutive, global circRNA overexpression as well as inducible circRNA expression directed specifically to melanocytes in a melanoma mouse model. Overall, these tools expand the genetic toolkit available for the functional characterization of circRNAs of interest.


2006 ◽  
Vol 177 (6) ◽  
pp. 4132-4140 ◽  
Author(s):  
Daniela Melillo ◽  
Georgia Sfyroera ◽  
Rosaria De Santis ◽  
Rita Graziano ◽  
Rita Marino ◽  
...  

2021 ◽  
Vol 9 (4) ◽  
pp. 407-416
Author(s):  
Satyabrata Nanda ◽  
◽  
Gagan Kumar ◽  
Sudheer Kumar Yadav ◽  
Sajid Hussain ◽  
...  

The GATA transcription factors (TFs) play a crucial role in regulating various physiological processes in plants. Identification and characterization of the GATA TF family has been carried out in several important grass species, including rice, maize, and bamboo. However, no information is available on the GATA TFs in the C3 grass species Dichanthelium oligosanthes. In the current study, 31 GATA genes have been identified in the D. oligosanthes genome by stringent bioinformatics analysis. The exon-intron arrangement analysis of the DoGATAs via the Gene Structure Display Server (GSDS 2.0) revealed the redundancy and differences in their gene structural organization. In addition, the sequence comparisons within the DoGATAs via BLAST revealed 11 numbers of putative paralogs. Similarly, the BLAST comparisons among the OsGATAs and DoGATAs resulted in the identification of 21 orthologs. Structural analysis of the identified DoGATAs through Simple Modular Architecture Research Tool (SMART), Conserved Domain Database (CDD), and Multiple Expectation Maximization for Motif Elicitation (MEME) revealed that all of them possess the signature GATA domain and the C-X2-C-X18-C-X2-C consensus sequence. The phylogenetic analysis via MEGA divided the DoGATAs into four groups along with rice and Arabidopsis GATAs. In addition, the subcellular localization, gene ontology, and other peptide functional prediction results further supported the DoGATAs to be putative GATA genes. Moreover, the findings of this study can serve as a basic framework for the isolation and functional characterization of GATA genes in D. oligosanthes.


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