scholarly journals Sedimentary radium isotope activity around Guaymas Basin from samples collected by HOV Alvin during R/V Atlantis cruise AT37-06 in December 2016

2019 ◽  
Author(s):  
Richard Peterson
Keyword(s):  
Radium Isotope ◽  
Guaymas Basin

scholarly journals Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments

2021 ◽  
Author(s):  
Sherlynette Pérez Castro ◽  
Mikayla A. Borton ◽  
Kathleen Regan ◽  
Isabella Hrabe de Angelis ◽  
Kelly C. Wrighton ◽  
...  
Keyword(s):  
Nucleic Acids ◽  
Extracellular Enzyme ◽  
Trophic Levels ◽  
Glycoside Hydrolases ◽  
Biological Macromolecules ◽  
Guaymas Basin ◽  
Bacterial Phyla ◽  
Sugar Transporters ◽  
Hydrothermal Sediments ◽  
Thermophilic Conditions

AbstractHydrothermal sediments contain large numbers of uncultured heterotrophic microbial lineages. Here, we amended Guaymas Basin sediments with proteins, polysaccharides, nucleic acids or lipids under different redox conditions and cultivated heterotrophic thermophiles with the genomic potential for macromolecule degradation. We reconstructed 20 metagenome-assembled genomes (MAGs) of uncultured lineages affiliating with known archaeal and bacterial phyla, including endospore-forming Bacilli and candidate phylum Marinisomatota. One Marinisomatota MAG had 35 different glycoside hydrolases often in multiple copies, seven extracellular CAZymes, six polysaccharide lyases, and multiple sugar transporters. This population has the potential to degrade a broad spectrum of polysaccharides including chitin, cellulose, pectin, alginate, chondroitin, and carrageenan. We also describe thermophiles affiliating with the genera Thermosyntropha, Thermovirga, and Kosmotoga with the capability to make a living on nucleic acids, lipids, or multiple macromolecule classes, respectively. Several populations seemed to lack extracellular enzyme machinery and thus likely scavenged oligo- or monomers (e.g., MAGs affiliating with Archaeoglobus) or metabolic products like hydrogen (e.g., MAGs affiliating with Thermodesulfobacterium or Desulforudaceae). The growth of methanogens or the production of methane was not observed in any condition, indicating that the tested macromolecules are not degraded into substrates for methanogenesis in hydrothermal sediments. We provide new insights into the niches, and genomes of microorganisms that actively degrade abundant necromass macromolecules under oxic, sulfate-reducing, and fermentative thermophilic conditions. These findings improve our understanding of the carbon flow across trophic levels and indicate how primary produced biomass sustains complex and productive ecosystems.

scholarly journals Noble gases in sediment pore water yield insights into hydrothermal fluid transport in the northern Guaymas Basin

2021 ◽  
Vol 434 ◽  
pp. 106419
Author(s):  
E. Horstmann ◽  
Y. Tomonaga ◽  
M.S. Brennwald ◽  
M. Schmidt ◽  
V. Liebetrau ◽  
...  
Keyword(s):  
Pore Water ◽  
Hydrothermal Fluid ◽  
Fluid Transport ◽  
Noble Gases ◽  
Water Yield ◽  
Sediment Pore Water ◽  
Guaymas Basin

scholarly journals Effects of Temperature and Pressure on Sulfate Reduction and Anaerobic Oxidation of Methane in Hydrothermal Sediments of Guaymas Basin

2004 ◽  
Vol 70 (2) ◽  
pp. 1231-1233 ◽  
Author(s):  
Jens Kallmeyer ◽  
Antje Boetius
Keyword(s):  
Sulfate Reduction ◽  
Deep Sea ◽  
Anaerobic Oxidation Of Methane ◽  
Anaerobic Oxidation ◽  
Guaymas Basin ◽  
Oxidation Of Methane ◽  
Hydrothermal Sediments ◽  
Deep Sea Sediments ◽  
Effects Of Temperature ◽  
Temperature And Pressure

ABSTRACT Rates of sulfate reduction (SR) and anaerobic oxidation of methane (AOM) in hydrothermal deep-sea sediments from Guaymas Basin were measured at temperatures of 5 to 200°C and pressures of 1 × 105, 2.2 × 107, and 4.5 × 107 Pa. A maximum SR of several micromoles per cubic centimeter per day was found at between 60 and 95°C and 2.2 × 107 and 4.5 × 107 Pa. Maximal AOM was observed at 35 to 90°C but generally accounted for less than 5% of SR.

scholarly journals Why Orange Guaymas Basin Beggiatoa spp. Are Orange: Single-Filament-Genome-Enabled Identification of an Abundant Octaheme Cytochrome with Hydroxylamine Oxidase, Hydrazine Oxidase, and Nitrite Reductase Activities

2012 ◽  
Vol 79 (4) ◽  
pp. 1183-1190 ◽  
Author(s):  
Barbara J. MacGregor ◽  
Jennifer F. Biddle ◽  
Jason R. Siebert ◽  
Eric Staunton ◽  
Eric L. Hegg ◽  
...  
Keyword(s):  
Nitrite Reductase ◽  
Pure Culture ◽  
Gulf Of California ◽  
Microbial Mats ◽  
Physiological Role ◽  
Nitrite Reduction ◽  
Cold Seeps ◽  
Single Filament ◽  
Guaymas Basin ◽  
Content Type

ABSTRACTOrange, white, and yellow vacuolatedBeggiatoaceaefilaments are visually dominant members of microbial mats found near sea floor hydrothermal vents and cold seeps, with orange filaments typically concentrated toward the mat centers. No marine vacuolateBeggiatoaceaeare yet in pure culture, but evidence to date suggests they are nitrate-reducing, sulfide-oxidizing bacteria. The nearly complete genome sequence of a single orangeBeggiatoa(“CandidatusMaribeggiatoa”) filament from a microbial mat sample collected in 2008 at a hydrothermal site in Guaymas Basin (Gulf of California, Mexico) was recently obtained. From this sequence, the gene encoding an abundant soluble orange-pigmented protein in Guaymas Basin mat samples (collected in 2009) was identified by microcapillary reverse-phase high-performance liquid chromatography (HPLC) nano-electrospray tandem mass spectrometry (μLC–MS-MS) of a pigmented band excised from a denaturing polyacrylamide gel. The predicted protein sequence is related to a large group of octaheme cytochromes whose few characterized representatives are hydroxylamine or hydrazine oxidases. The protein was partially purified and shown byin vitroassays to have hydroxylamine oxidase, hydrazine oxidase, and nitrite reductase activities. From what is known ofBeggiatoaceaephysiology, nitrite reduction is the most likelyin vivorole of the octaheme protein, but future experiments are required to confirm this tentative conclusion. Thus, while present-day genomic and proteomic techniques have allowed precise identification of an abundant mat protein, and its potential activities could be assayed, proof of its physiological role remains elusive in the absence of a pure culture that can be genetically manipulated.

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