scholarly journals Homogeneous Cytochrome 579 Is an Octamer That Reacts Too Slowly With Soluble Iron to Be the Initial Iron Oxidase in the Respiratory Chain of Leptospirillum ferriphilum

2021 ◽  
Vol 12 ◽  
Author(s):  
Robert C. Blake ◽  
John E. Shively ◽  
Russell Timkovich ◽  
Richard Allen White

The exact role that cytochrome 579 plays in the aerobic iron respiratory chain of Leptospirillum ferriphilum is unclear. This paper presents genomic, structural, and kinetic data on the cytochrome 579 purified from cell-free extracts of L. ferriphilum cultured on soluble iron. Electrospray mass spectrometry of electrophoretically homogeneous cytochrome 579 yielded two principal peaks at 16,015 and 16,141 Daltons. N-terminal amino acid sequencing of the purified protein yielded data that were used to determine the following: there are seven homologs of cytochrome 579; each homolog possesses the CXXCH heme-binding motif found in c-type cytochromes; each of the seven sequenced strains of L. ferriphilum expresses only two of the seven homologs of the cytochrome; and each homolog contains an N-terminal signal peptide that directs the mature protein to an extra-cytoplasmic location. Static light scattering and macroion mobility measurements on native cytochrome 579 yielded masses of 125 and 135 kDaltons, respectively. The reduced alkaline pyridine hemochromogen spectrum of the purified cytochrome had an alpha absorbance maximum at 567 nm, a property not exhibited by any known heme group. The iron-dependent reduction and oxidation of the octameric cytochrome exhibited positively cooperative kinetic behavior with apparent Hill coefficients of 5.0 and 3.7, respectively, when the purified protein was mixed with mM concentrations of soluble iron. Consequently, the extrapolated rates of reduction at sub-mM iron concentrations were far too slow for cytochrome 579 to be the initial iron oxidase in the aerobic respiratory chain of L. ferriphilum. Rather, these observations support the hypothesis that the acid-stable cytochrome 579 is a periplasmic conduit of electrons from initial iron oxidation in the outer membrane of this Gram-negative bacterium to a terminal oxidase in the plasma membrane.

2002 ◽  
Vol 46 (1-2) ◽  
pp. 55-60 ◽  
Author(s):  
R. Yamamoto-Ikemoto ◽  
T. Komori ◽  
S. Matsui

Iron oxidation and reduction were examined using the activated sludge from a municipal plant. Iron contents of the activated sludge were 1–2%. Iron oxidation rates were correlated with the initial iron concentrations. Iron reducing rates could be described by the Monod equation. The effects of iron reducing bacteria on sulfate reduction, denitrification and poly-P accumulation were examined. Iron reduction suppressed sulfate reduction by competing with hydrogen produced from protein. Denitrification was outcompeted with iron reduction and sulfate reduction. These phenomena could be explained thermodynamically. Poly-P accumulation was also suppressed by denitrification. The activity of iron reduction was relatively high.


2013 ◽  
Vol 825 ◽  
pp. 238-241 ◽  
Author(s):  
Porogo Duku ◽  
Sanet H. Minnaar ◽  
Susan T.L. Harrison ◽  
Jochen Petersen

A novel apparatus was developed to test the ferrous iron oxidation kinetics of Leptospirillum ferriphilum in predominantly sessile culture, by combining a CSTR under wash-out conditions with a packed bed of inert ceramic saddles. Results indicate that a dense culture of sessile bacteria is established rapidly, which achieves high oxidation rates in all experiments with a yield in terms of CO2 uptake rates comparable or higher to what has been measured in planktonic culture. However, the yield in terms of cell counts changes dramatically, indicating a substantial shift in carbon utilisation in the sessile culture. The apparatus is feasible as a method to study iron oxidation kinetics of sessile cultures, providing it is operated at sufficiently high recycle ratios.


2009 ◽  
Vol 71-73 ◽  
pp. 259-262 ◽  
Author(s):  
Tunde Victor Ojumu ◽  
Jochen Petersen

The kinetics of microbial ferrous-iron oxidation have been well studied as it is a critical sub-process in bioleaching of sulphide minerals. Exhaustive studies in continuous culture have been carried out recently, investigating the effects of conditions relevant to heap bioleaching on the microbial ferrous-iron oxidation by Leptospirillum ferriphilum [1-3]. It was postulated that ferric-iron, which is known to be inhibitory, also acts as a stress stimulus, promoting microbial growth at higher total iron concentration. This paper investigates this phenomenon further, by comparing tests run with pure ferrous-iron feeds against those where the feed is partially oxidised to ferric at comparable concentrations. The findings clearly suggest that, contrary to reactor theory, it is indeed ferrous iron concentration in the reactor feed that determines biomass concentration and that ferric iron concentration has little effect on microbial growth. Further mathematical analysis shows that the phenomenon can be explained on the basis of the Pirt equation and the particular reaction conditions employed in the test work.


2007 ◽  
Vol 88 (1-4) ◽  
pp. 67-74 ◽  
Author(s):  
Bestamin Ozkaya ◽  
Erkan Sahinkaya ◽  
Pauliina Nurmi ◽  
Anna H. Kaksonen ◽  
Jaakko A. Puhakka

2009 ◽  
Vol 71-73 ◽  
pp. 255-258 ◽  
Author(s):  
K. Penev ◽  
D. Karamanev

The effects of temperature, pH and iron concentration on the kinetics of ferrous iron biooxidation by a free suspended culture of Leptospirillum ferriphilum were studied in shake flasks and a circulating bed bioreactor at moderate to high total iron concentration. The kinetic study showed that there are two distinct modes of iron biooxidation: growth associated and non-growth associated, depending on the pH of the medium. There were also distinctive maxima of the effect of temperature and pH on the rate of biooxidation. A kinetic model of the process was proposed, based on an electrochemical-enzymatic model. The proposed model indicates that at moderate to high concentrations (above ~12 g/L), the total iron concentration becomes the single most prominent inhibiting factor.


2007 ◽  
Vol 20-21 ◽  
pp. 156-159 ◽  
Author(s):  
Tunde Victor Ojumu ◽  
Jochen Petersen ◽  
Geoffrey S. Hansford

In heap bioleaching the dissolution of gangue minerals from igneous ore materials can lead to the build-up of considerable concentrations of Mg and Al sulphates in the recycled leach solution. This may interfere with microbial ferrous iron oxidation, which drives the oxidation of the target minerals. The kinetics of the oxidation process have been well studied for Leptospirillum and Acidithiobacillus species in tank systems. Although not directly comparable, kinetic parameters derived for tank systems do apply also for heap bioleach conditions. In the present study the effect of solution concentrations of Mg and Al as sulphate at individual concentrations of 0 to 10 g/L and combined concentrations 0 to 16 g/L each has been investigated in continuous culture using Leptospirillum ferriphilum. Increasing the concentrations of the salts increasingly depresses the rate of ferrous iron oxidation and also shifts the viable range more and more into the low potential region. Al significantly reduces the amount of carbon maintained in the reactor (assumed to be commensurate with biomass), whereas Mg actually enhances it at low concentrations. In both cases, however, the rate is always depressed. The results indicate that heap cultures are likely to perform sub-optimally in those operations where build-up of dissolved gangue minerals is not controlled.


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