scholarly journals Occurrence Prediction of the Citrus Flatid Planthopper (Metcalfa pruinosa (Say, 1830)) in South Korea Using a Random Forest Model

Forests ◽  
2019 ◽  
Vol 10 (7) ◽  
pp. 583 ◽  
Author(s):  
Dae-Seong Lee ◽  
Yang-Seop Bae ◽  
Bong-Kyu Byun ◽  
Seunghwan Lee ◽  
Jong Kyun Park ◽  
...  
Keyword(s):  
Invasive Species ◽  
Random Forest ◽  
South Korea ◽  
Random Forest Model ◽  
Maximum Temperature ◽  
Forest Model ◽  
Government Documents ◽  
Surveillance Programs ◽  
Occurrence Patterns ◽  
Hazard Rating

Invasive species cause a severe impact on existing ecosystems. The citrus flatid planthopper (CFP; Metcalfa pruinosa (Say, 1830)) is an invasive species in many countries. Predicting potential occurrence areas of the species related to environmental conditions is important for effective forest ecosystem management. In this study, we evaluated the occurrence patterns of the CFP and predicted its potential occurrence areas in South Korea using a random forest model for a hazard rating of forests considering meteorological and landscape variables. We obtained the occurrence data of the CFP in South Korea from literature and government documents and extracted seven environmental variables (altitude, slope, distance to road (geographical), annual mean temperature, minimum temperature in January, maximum temperature in July, and annual precipitation (meteorological)) and the proportion of land cover types across seven categories (urban, agriculture, forest, grassland, wetland, barren, and water) at each occurrence site from digital maps using a Geographic Information System. The CFP occurrence areas were mostly located at low altitudes, near roads and urbanized areas. Our prediction model also supported these results. The CFP has a high potential to be distributed over the whole of South Korea, excluding high mountainous areas. Finally, factors related to human activities, such as roads and urbanization, strongly influence the occurrence and dispersal of the CFP. Therefore, we propose that these factors should be considered carefully in monitoring and surveillance programs for the CFP and other invasive species.

scholarly journals Spatial Prediction of the Forest Soil Water Holding Capacities in Temperate Region on a National Scale With Random Forest Models

2021 ◽  
Author(s):  
Hyunje Yang ◽  
Honggeun Lim ◽  
Hyung Tae Choi
Keyword(s):  
Random Forest ◽  
South Korea ◽  
Soil Properties ◽  
Water Content ◽  
Spatial Prediction ◽  
Random Forest Model ◽  
National Scale ◽  
Environmental Covariates ◽  
Forest Model ◽  
Water Holding

Soil water holding capacities (SWHCs) is important input factor in hydrological simulation models for sustainable water management. Forests that covered 63% of South Korea are the main source of clean water, and it is essential to estimate SWHCs on a nationwide scale for effective forest water resources management. However, there are a few studies estimating SWHCs on a nationwide scale in the temperate regions especially in South Korea. Fortunately, forest spatial big data have been collected on a national scale, and the nationwide prediction of the SWHC can be possible with this dataset. In this study, spatial prediction of forest SWHCs (saturated water content, water content at pF1.8 and 2.7) was conducted with 953 forest soil samples and forest spatial big dataset. 4 soil properties and 14 environmental covariates were used for predicting SWHCs. Simple linear regression and random forest model were compared for selecting the optimal predictive model. From the variable importance analysis, environmental covariates had as big importance as soil properties had. And prediction performance of the model with environmental covariates as the input data was higher than that of the model with soil properties. Comparing two models, the random forest model could accurately and stably predict SWHCs than the simple linear model. As a result of spatial prediction of SWHCs at the national scale through the random forest model and the forest spatial big dataset, it was confirmed that higher SWHCs were distributed along with the Baekdudaegan, the watershed-crest-line in South Korea.

scholarly journals Clinical trial registries as Scientometric data: A novel solution for linking and deduplicating clinical trials from multiple registries

2021 ◽  
Author(s):  
Christian Thiele ◽  
Gerrit Hirschfeld ◽  
Ruth von Brachel
Keyword(s):  
Clinical Trials ◽  
Random Forest ◽  
Random Forest Model ◽  
Scientometric Analysis ◽  
Data Set ◽  
The Public ◽  
Forest Model ◽  
Clinical Trial Registries ◽  
Multiple Primary ◽  
Clinical Trials Registry

AbstractRegistries of clinical trials are a potential source for scientometric analysis of medical research and serve important functions for the research community and the public at large. Clinical trials that recruit patients in Germany are usually registered in the German Clinical Trials Register (DRKS) or in international registries such as ClinicalTrials.gov. Furthermore, the International Clinical Trials Registry Platform (ICTRP) aggregates trials from multiple primary registries. We queried the DRKS, ClinicalTrials.gov, and the ICTRP for trials with a recruiting location in Germany. Trials that were registered in multiple registries were linked using the primary and secondary identifiers and a Random Forest model based on various similarity metrics. We identified 35,912 trials that were conducted in Germany. The majority of the trials was registered in multiple databases. 32,106 trials were linked using primary IDs, 26 were linked using a Random Forest model, and 10,537 internal duplicates on ICTRP were identified using the Random Forest model after finding pairs with matching primary or secondary IDs. In cross-validation, the Random Forest increased the F1-score from 96.4% to 97.1% compared to a linkage based solely on secondary IDs on a manually labelled data set. 28% of all trials were registered in the German DRKS. 54% of the trials on ClinicalTrials.gov, 43% of the trials on the DRKS and 56% of the trials on the ICTRP were pre-registered. The ratio of pre-registered studies and the ratio of studies that are registered in the DRKS increased over time.

scholarly journals Multi-Scenario Prediction of Intra-Urban Land Use Change Using a Cellular Automata-Random Forest Model

2021 ◽  
Vol 10 (8) ◽  
pp. 503
Author(s):  
Hang Liu ◽  
Riken Homma ◽  
Qiang Liu ◽  
Congying Fang
Keyword(s):  
Land Use ◽  
Random Forest ◽  
Cellular Automata ◽  
Land Use Change ◽  
Urban Land ◽  
Urban Land Use ◽  
Random Forest Model ◽  
Growth Trend ◽  
Related Factors ◽  
Forest Model

The simulation of future land use can provide decision support for urban planners and decision makers, which is important for sustainable urban development. Using a cellular automata-random forest model, we considered two scenarios to predict intra-land use changes in Kumamoto City from 2018 to 2030: an unconstrained development scenario, and a planning-constrained development scenario that considers disaster-related factors. The random forest was used to calculate the transition probabilities and the importance of driving factors, and cellular automata were used for future land use prediction. The results show that disaster-related factors greatly influence land vacancy, while urban planning factors are more important for medium high-rise residential, commercial, and public facilities. Under the unconstrained development scenario, urban land use tends towards spatially disordered growth in the total amount of steady growth, with the largest increase in low-rise residential areas. Under the planning-constrained development scenario that considers disaster-related factors, the urban land area will continue to grow, albeit slowly and with a compact growth trend. This study provides planners with information on the relevant trends in different scenarios of land use change in Kumamoto City. Furthermore, it provides a reference for Kumamoto City’s future post-disaster recovery and reconstruction planning.

scholarly journals Estimates of daily ground-level NO2 concentrations in China based on Random Forest model integrated K-means

2021 ◽  
pp. 100017
Author(s):  
Xinyu Dou ◽  
Cuijuan Liao ◽  
Hengqi Wang ◽  
Ying Huang ◽  
Ying Tu ◽  
...  
Keyword(s):  
Random Forest ◽  
Ground Level ◽  
Random Forest Model ◽  
Forest Model

scholarly journals Identification of candidate biomarkers of liver hydatid disease via microarray profiling, bioinformatics analysis, and machine learning

2021 ◽  
Vol 49 (3) ◽  
pp. 030006052199398
Author(s):  
Jinwu Peng ◽  
Zhili Duan ◽  
Yamin Guo ◽  
Xiaona Li ◽  
Xiaoqin Luo ◽  
...  
Keyword(s):  
Random Forest ◽  
Hydatid Disease ◽  
Characteristic Curve ◽  
Receiver Operator Characteristic Curve ◽  
Random Forest Model ◽  
Hepatic Hydatid Disease ◽  
Forest Model ◽  
Protein Protein Interaction ◽  
Ppi Networks ◽  
Microarray Profiling

Objectives Liver echinococcosis is a severe zoonotic disease caused by Echinococcus (tapeworm) infection, which is epidemic in the Qinghai region of China. Here, we aimed to explore biomarkers and establish a predictive model for the diagnosis of liver echinococcosis. Methods Microarray profiling followed by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis was performed in liver tissue from patients with liver hydatid disease and from healthy controls from the Qinghai region of China. A protein–protein interaction (PPI) network and random forest model were established to identify potential biomarkers and predict the occurrence of liver echinococcosis, respectively. Results Microarray profiling identified 1152 differentially expressed genes (DEGs), including 936 upregulated genes and 216 downregulated genes. Several previously unreported biological processes and signaling pathways were identified. The FCGR2B and CTLA4 proteins were identified by the PPI networks and random forest model. The random forest model based on FCGR2B and CTLA4 reliably predicted the occurrence of liver hydatid disease, with an area under the receiver operator characteristic curve of 0.921. Conclusion Our findings give new insight into gene expression in patients with liver echinococcosis from the Qinghai region of China, improving our understanding of hepatic hydatid disease.

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