scholarly journals Profiling Murchison Soluble Organic Matter for New Organic Compounds with APPI- and ESI-FT-ICR MS

Life ◽  
2019 ◽  
Vol 9 (2) ◽  
pp. 48 ◽  
Author(s):  
Jasmine Hertzog ◽  
Hiroshi Naraoka ◽  
Philippe Schmitt-Kopplin

The investigation of the abundant organic matter in primitive meteorite such as carbonaceous chondrites is of major interest in the field of origin of life. In this study, the soluble organic fraction of the Murchison meteorite was analyzed by atmospheric pressure photoionization (APPI) and electrospray ionization (ESI) Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS), in both detection modes. Such an approach ensured that we obtained an extensive description of the organic matter of the CM2 meteorite. Indeed, while in total close to 16,000 unique features were assigned, only 4% are common to all analyses, illustrating the complementarity of both the detection modes and the ionization sources. ESI FT-ICR MS analysis, in negative-ion mode, ensured to observe specifically CHOS and CHNOS species, whereas the positive-ion mode is more dedicated to the detection of CHNO and CHN species. Moreover, new organomagnesium components were observed in (+) ESI. Eventually, (+) APPI FT-ICR MS analysis was a preferred method for the detection of less polar or nonpolar species such as polycyclic aromatic hydrocarbons but also heteroatom aromatic species composing the organic matter of Murchison.

2019 ◽  
Author(s):  
Jiang Bin ◽  
Zhan Zhao-Wen ◽  
Shi Quan ◽  
Liao Yuhong ◽  
Zou Yan-Rong
Keyword(s):  

2018 ◽  
Vol 91 (3) ◽  
pp. 2209-2215 ◽  
Author(s):  
Bin Jiang ◽  
Zhao-Wen Zhan ◽  
Quan Shi ◽  
Yuhong Liao ◽  
Yan-Rong Zou ◽  
...  
Keyword(s):  

Water ◽  
2020 ◽  
Vol 12 (2) ◽  
pp. 331 ◽  
Author(s):  
Christin Wilske ◽  
Peter Herzsprung ◽  
Oliver J. Lechtenfeld ◽  
Norbert Kamjunke ◽  
Wolf von Tümpling

Photochemical processing is an important way to transform terrestrial dissolved organic matter (DOM) but was rarely investigated by ultra-high resolution mass spectrometry. We performed an irradiation experiment with water from a shaded forest stream flowing into a lit reservoir. Bacterial activity explained only 1% of dissolved organic carbon (DOC) decline in a combined bacterial and photodegradation approach. Photodegradation decreased the DOC concentration by 30%, the specific ultraviolet (UV) absorption by 40%–50%, and fluorescence intensity by 80% during six days. The humification index (HIX) decreased whereas the fluorescence index (FI) did not change. Two humic-like components identified by parallel factor analysis (PARAFAC) of excitation–emission matrices followed the decrease of fluorescent DOM. Changes of relative peak intensities of Fourier transform-ion cyclotron resonance mass spectroscopy (FT-ICR MS) elemental formula components as a function of cumulated radiation were evaluated both by Spearman’s rank correlation and linear regression. The FT-ICR MS intensity changes indicate that high aromatic material was photochemically converted into smaller non-fluorescent molecules or degraded by the release of CO2. This study shows the molecular change of terrestrial DOM before the preparation of drinking water from reservoirs.


2012 ◽  
Vol 9 (6) ◽  
pp. 1935-1955 ◽  
Author(s):  
R. Flerus ◽  
O. J. Lechtenfeld ◽  
B. P. Koch ◽  
S. L. McCallister ◽  
P. Schmitt-Kopplin ◽  
...  

Abstract. Dissolved organic matter (DOM) was extracted by solid-phase extraction (SPE) from 137 water samples from different climate zones and different depths along an eastern Atlantic Ocean transect. The extracts were analyzed with Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) with electrospray ionization (ESI). Δ14C analyses were performed on subsamples of the SPE-DOM. In addition, the amount of dissolved organic carbon was determined for all water and SPE-DOM samples as well as the yield of amino sugars for selected samples. Linear correlations were observed between the magnitudes of 43 % of the FT-ICR mass peaks and the extract Δ14C values. Decreasing SPE-DOM Δ14C values went along with a shift in the molecular composition to higher average masses (m/z) and lower hydrogen/carbon (H/C) ratios. The correlation was used to model the SPE-DOM Δ14C distribution for all 137 samples. Based on single mass peaks, a degradation index (IDEG) was developed to compare the degradation state of marine SPE-DOM samples analyzed with FT-ICR MS. A correlation between Δ14C, IDEG, DOC values and amino sugar yield supports that SPE-DOM analyzed with FT-ICR MS reflects trends of bulk DOM. DOM weighted normalized mass peak magnitudes were used to compare aged and recent SPE-DOM on a semi-quantitative molecular basis. The magnitude comparison showed a continuum of different degradation rates for the detected compounds. A high proportion of the compounds should persist, possibly modified by partial degradation, in the course of thermohaline circulation. Prokaryotic (bacterial) production, transformation and accumulation of this very stable DOM occur primarily in the upper ocean. This DOM is an important contribution to very old DOM, showing that production and degradation are dynamic processes.


2009 ◽  
Vol 9 (7) ◽  
pp. 2533-2542 ◽  
Author(s):  
K. E. Altieri ◽  
B. J. Turpin ◽  
S. P. Seitzinger

Abstract. Wet deposition is an important removal mechanism for atmospheric organic matter, and a potentially important input for receiving ecosystems, yet less than 50% of rainwater organic matter is considered chemically characterized. Precipitation samples collected in New Jersey, USA, were analyzed by negative ion ultra-high resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). Elemental compositions of 552 unique molecular species were determined in the mass range 50–500 Da in the rainwater. Four main groups of organic compounds were identified: compounds containing carbon, hydrogen, and oxygen (CHO) only, sulfur (S) containing CHOS compounds, nitrogen (N) containing CHON compounds, and S- and N- containing CHONS compounds. Organic acids commonly identified in precipitation were detected in the rainwater. Within the four main groups of compounds detected in the rainwater, oligomers, organosulfates, and nitrooxy-organosulfates were assigned based on elemental formula comparisons. The majority of the compounds identified are products of atmospheric reactions and are known contributors to secondary organic aerosol (SOA) formed from gas phase, aerosol phase, and in-cloud reactions in the atmosphere. It is suggested that the large uncharacterized component of SOA is the main contributor to the large uncharacterized component of rainwater organic matter.


2011 ◽  
Vol 8 (6) ◽  
pp. 11453-11488 ◽  
Author(s):  
R. Flerus ◽  
B. P. Koch ◽  
O. J. Lechtenfeld ◽  
S. L. McCallister ◽  
P. Schmitt-Kopplin ◽  
...  

Abstract. Dissolved organic matter (DOM) was extracted with solid phase extraction (SPE) from 137 water samples from different climate zones and different depths along an Eastern Atlantic Ocean transect. The extracts were analyzed with Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) with electrospray ionization (ESI). Δ14C analyses were performed on subsamples of the SPE-DOM. In addition, the amount of dissolved organic carbon was determined for all water and SPE-DOM samples as well as the yield of amino sugars for selected samples. Linear correlations were observed between the magnitudes of 43 % of the FT-ICR mass peaks and the extract Δ14C values. Decreasing SPE-DOM Δ14C values went along with a shift in the molecular composition to higher average masses (m/z) and lower hydrogen/carbon (H/C) ratios. The correlation was used to model the SPE-DOM Δ14C distribution for all 137 samples. Based on single mass peaks a degradation index was developed to compare the degradation state of marine SPE-DOM samples analyzed with FT-ICR MS. A correlation between Δ14C, degradation index, DOC values and amino sugar yield supports that SPE-DOM analyzed with FT-ICR MS reflects trends of bulk DOM. A relative mass peak magnitude ratio was used to compare aged SPE-DOM and fresh SPE-DOM regarding single mass peaks. The magnitude ratios show a continuum of different reactivities for the single compounds. Only few of the compounds present in the FT-ICR mass spectra are expected to be highly degraded in the oldest water masses of the Pacific Ocean. All other compounds should persist partly thermohaline circulation. Prokaryotic (bacterial) production, transformation and accumulation of this very stable DOM occurs probably primarily in the upper ocean. This DOM is an important contribution to very old DOM, showing that production and degradation are dynamic processes.


2020 ◽  
Author(s):  
Johanna Menges ◽  
Niels Hovius ◽  
Stefanie Poetz ◽  
Helena Osterholz ◽  
Dirk Sachse

<p>On long timescales, carbon fluxes in and out of rock, soil and biological reservoirs control carbon dioxide concentrations in the atmosphere and therefore modulate global climate. For example, the transfer of particulate organic matter (POM) from mountain ranges into rivers and subsequent burial in the ocean constitutes a carbon sink from the atmosphere if the eroded POM is sourced from vegetation and soils. In contrast, the transfer and burial of rock-derived petrogenic POM has no effect on atmospheric carbon concentrations. However, if petrogenic POM is remineralized during transfer, often mediated by microorganisms, it constitutes a carbon source to the atmosphere. To evaluate the net effect of these processes, it is essential to understand sourcing, mobilization and fluxes of POM. Bulk stable and radiogenic isotopes as well as a range of lipid biomarkers and their stable isotope ratios have been used to trace the sourcing and transfer of POM. However, these methods are limited to the distinction of broad classes of source materials and do not contain information on potential molecular transformations during organic matter mobilization and transport.</p><p>Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR-MS) allows the simultaneous measurement of a large range of compounds (i.e. hundreds to thousands) and has been applied in dissolved organic matter research to trace different sources as well as to identify transformations. FT-ICR-MS measurements on solvent-extractable POM provide direct information on the compositional variability of POM with a much larger analytical window than single biomarker or bulk isotope analysis and additionally might allow to trace transformations of POM upon mobilization.</p><p>Here, we test this method to decipher the different sources of POM and their mobilization in the upper catchment of the trans-Himalayan Kali Gandaki River, which sources petrogenic POM from abundant Jurassic sediments as well as biospheric POM from aged and modern soils. We evaluate the potential of the high-resolution molecular dataset to identify new marker compounds for specific organic matter sources and, by applying indicator species analysis, to statistically identify indicator compounds. In a second step, we evaluate the potential to trace transformations across the mobilization step from each specific organic matter source to particulate organic matter in river sediments.</p><p>We found a large number of source-specific elemental formulas for biospheric carbon and strong heterogeneity for bedrock-derived organic carbon which highlights that petrogenic carbon varies in molecular composition depending on its (geological) origin. Regarding transformations, we found a loss of source-specific formulas during mobilization of organic matter, related to intrinsic chemical properties. These formulas were characterized by a higher number of double bond equivalents, a higher nominal oxidation state and higher oxygen content than formulas shared between riverine POM and source organic matter for all sources, which is consistent with the preferential loss of more labile organic matter during transport and/or mobilization. Overall, our study highlights the potential of FT-ICR-MS to identify molecular-level transformations of solvent extractable lipids along the source-to-sink pathway of sedimentary organic matter.</p>


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