scholarly journals Crystal Structure of an Anisotropic Pyrope Garnet That Contains Two Cubic Phases

Minerals ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 1320
Author(s):  
Sytle M. Antao

The crystal structure of two different samples of pyrope garnet, ideally Mg3Al2Si3O12, from South Africa was refined using the Rietveld method, space group Ia3¯d, and monochromatic synchrotron high-resolution powder X-ray diffraction (HRPXRD) data. Sample 1 from Wesselton Mine is a single cubic phase and is optically isotropic. Electron-probe microanalysis (EPMA) provided an average composition {Mg2.30Fe2+0.26Ca0.42Mn2+0.02}∑3[Al1.53Fe3+0.06Cr3+0.40Ti4+0.01Fe2+0.01]∑2Si3O12, which contains a significant amount of Cr cations. The unit-cell parameter (Å) and bond distances (Å) are a = 11.56197(1) Å, average <Mg-O> = 2.2985, Al-O = 1.9101(4), and Si-O = 1.6343(3) Å. Sample 2 from De Beers Diamond Mine has an average composition {Mg2.33Fe2+0.33Ca0.33Mn2+0.01}∑3[Al1.73Fe3+0.12Cr3+0.06Ti4+0.05Fe2+0.05]∑2Si3O12 and is a fine-scale intergrowth of two cubic phases. The weight percentage, unit-cell parameter (Å), and bond distances (Å) for phase 2a are 62.2(1)%, a = 11.56185(1) Å, average <Mg-O> = 2.3006, Al-O = 1.9080(4), Si-O = 1.6334(4) Å. The corresponding values for phase 2b are 37.8(1)%, a = 11.53896(1) Å, average <Mg-O> = 2.2954, Al-O = 1.9020(6), Si-O = 1.6334(6) Å. The two cubic phases in sample 2 cause the crystal to be optically anisotropic because of strain induce birefringence. The unit-cell parameter and bond distances for sample 1 are similar to those in phase 2a.

Author(s):  
Sytle M. Antao ◽  
Laura A. Cruickshank

The crystal structure of an optically anisotropic kimzeyite garnet from Magnet Cove, Arkansas, USA, where it was first discovered, was refined with the Rietveld method, cubic space group, Ia\overline 3 d, and monochromatic [λ = 0.41422 (2) Å] synchrotron high-resolution powder X-ray diffraction (HRPXRD) data. The Rietveld refinement reduced χ2and overallR(F2) values are 1.840 and 0.0647, respectively. The sample, with the general garnet formula[8]X3[6]Y2[4]Z3[4]O12, contains an intergrowth of two cubic phases that occur initially as oscillatory growth zoning, and patchy intergrowths arise later from fluid-enhanced dissolution and re-precipitation. The two compositions obtained with electron-probe microanalyses (EPMA) are Ca3.00(Zr1.31Ti4+0.46Fe3+0.22Mn3+0.01)∑2[Al0.76Fe3+1.01Si1.23]∑3O12for phase 1aand Ca2.99(Zr1.48Ti4+0.37Fe3+0.15)∑2[Al0.87Fe3+0.98Si1.15]∑3O12for phase 1b. The weight percentage, unit-cell parameter (Å), distances (Å), and site occupancy factors (s.o.f.s) for phase 1aare as follows: 42.6 (2)%,a= 12.46553 (3) Å, average 〈X—O〉 = 2.482,Y—O = 2.059 (2),Z—O = 1.761 (2) Å, Ca (Xs.o.f.) = 0.960 (4), Zr (Ys.o.f.) = 0.809 (3), and Fe (Zs.o.f.) = 0.623 (2). The corresponding values for phase 1bare 57.4 (2)%,a= 12.47691 (2) Å, average 〈X—O〉 = 2.482,Y—O = 2.062 (1),Z—O = 1.762 (1) Å, Ca (Xs.o.f.) = 0.957 (3), Zr (Ys.o.f.) = 0.828 (2) and Fe (Zs.o.f.) = 0.617 (2). The main structural differences between the two phases are in the unit-cell parameter, Δa= 0.01138 Å,Y(s.o.f.), andY—O distance. Structural mismatch between the two cubic phases in a crystal gives rise to strain-induced optical anisotropy.


1996 ◽  
Vol 11 (1) ◽  
pp. 31-34 ◽  
Author(s):  
Nicole M. L. N. P. Closset ◽  
René H. E. van Doorn ◽  
Henk Kruidhof ◽  
Jaap Boeijsma

The crystal structure of La1−xSrxCoO3−δ (0≤x≤0.6) has been studied, using powder X-Ray diffraction. The crystal structure shows a transition from rhombohedral distorted perovskite for LaCoO3−δ into cubic perovskite for La0.4Sr0.6CoO3−δ. The cubic unit cell parameter is ac=3.8342(1) Å for La0.4Sr0.6CoO3−δ, the space group probably being Pm3m. Using a hexagonal setting, the cell parameters for La0.5Sr0.5CoO3−δ, are a=5.4300(3) Å, c=13.2516(10) Å; a=5.4375(1) Å, c=13.2313(4) Å for La0.6Sr0.4CoO3−δ; a=5.4437(1) Å, c=13.2085(5) Å for La0.7Sr0.3CoO3−δ; a=5.4497(2) Å, c=13.1781(6) Å for La0.8Sr0.2CoO3−δ and a=5.4445(2) Å, c=13.0936(6) Å for LaCoO3−δ with the space group probably being R3c.


2017 ◽  
Vol 19 (40) ◽  
pp. 27725-27730 ◽  
Author(s):  
V. V. Novikov ◽  
K. S. Pilipenko ◽  
A. V. Matovnikov ◽  
N. V. Mitroshenkov ◽  
B. I. Kornev ◽  
...  

The temperature dependencies of heat capacity and cubic unit cell parameter for type-I clathrates were obtained to determine the influence of the concentration of vacancies and substituting atoms on the lattice dynamics.


2018 ◽  
Vol 74 (12) ◽  
pp. 1778-1782
Author(s):  
Juan Alberto Reyes Perea ◽  
Sylvain Bernès ◽  
Ma Guadalupe Quintero Téllez

The crystal structure of the title complex (systematic name:trans-aquachlorido{2,2′[ethane-1,2-diylbis(nitrilomethylidyne)]diphenolato-κ4O,N,N′,O′}manganese(III) monohydrate), [Mn(C16H14N2O2)Cl(H2O)]·H2O has been reported previously in the space groupP21/n[Panjaet al.(2003).Polyhedron,22, 1191–1198]. We obtained the same hydrated complex through an alternative synthesis, and crystallized a new polymorph, in the space groupP21. The molecular conformation of the complex is virtually unmodified, but the absence of the glide plane in the new polymorph halves the unit-cell parameterc, affording a non-centrosymmetric crystal structure withZ= 2, while the previously reported crystal is centrosymmetric withZ= 4. Both phases represent a case of packing polymorphism, similar to other dimorphic crystal structures retrieved from the Cambridge Structural Database.


2020 ◽  
Vol 105 (7) ◽  
pp. 1088-1098 ◽  
Author(s):  
Cristian Biagioni ◽  
Daniela Mauro ◽  
Marco Pasero ◽  
Elena Bonaccorsi ◽  
Giovanni Orazio Lepore ◽  
...  

Abstract Thallium-bearing samples of alum-(K) and voltaite from the Fornovolasco mining complex (Apuan Alps, Tuscany, Italy) have been characterized through X-ray diffraction, chemical analyses, micro-Raman, infrared (FTIR), Mössbauer, and X-ray absorption spectroscopy (XAS). Alum-(K) occurs as anhedral colorless grains or rarely as octahedral crystals, up to 5 mm. Electron-microprobe analysis points to the chemical formula (K0.74Tl0.10)Σ0.84(Al0.84Fe0.14)Σ0.98S2.03O8·12H2O. The occurrence of minor NH4+ was detected through FTIR spectroscopy. Its unit-cell parameter is a = 12.2030(2) Å, V = 1817.19(9) Å3, space group Pa3. Its crystal structure has been refined down to R1 = 0.0351 for 648 reflections with Fo &gt; 4σ(Fo) and 61 refined parameters. The crystal structure refinement agrees with the partial substitution of K by 12 mol% Tl. This substitution is confirmed by XAS data, showing the presence of Tl+ having a first coordination shell mainly formed by 6 O atoms at 2.84(2) Å. Voltaite occurs as dark green cubic crystals, up to 1 mm in size. Voltaite is chemically zoned, with distinct domains having chemical formula (K1.94Tl0.28)Σ2.22(Fe3.572+Mg0.94Mn0.55)Σ5.06Fe3.063+Al0.98S11.92O48·18H2O and (K2.04Tl0.32)Σ2.36(Fe3.832+Mg0.91Mn0.29)Σ5.03Fe3.053+Al0.97S11.92O48·18H2O, respectively. Infrared spectroscopy confirmed the occurrence of minor NH4+ also in voltaite. Its unit-cell parameter is a = 27.2635 Å, V = 20265(4) Å3, space group Fd3c. The crystal structure was refined down to R1 = 0.0434 for 817 reflections with Fo &gt; 4σ(Fo) and 87 refined parameters. The partial replacement of K by Tl is confirmed by the structural refinement. XAS spectroscopy showed that Tl+ is bonded to six O atoms, at 2.89(2) Å. The multi-technique characterization of thallium-bearing alum-(K) and voltaite improves our understanding of the role of K-bearing sulfates in immobilizing Tl in acid mine drainage systems, temporarily avoiding its dispersion in the environment.


2016 ◽  
Vol 31 (4) ◽  
pp. 292-294 ◽  
Author(s):  
V. D. Zhuravlev ◽  
A. P. Tyutyunnik ◽  
N. I. Lobachevskaya

A polycrystalline sample of Ca4ZrGe3O12 was synthesized using the nitrate–citrate method and heated at 850–1100 °C. Structural refinement based on X-ray powder diffraction data showed that the crystal structure is of the garnet type with a cubic unit-cell parameter [a = 12.71299(3) Å] and the space group Ia$\bar 3$d. The structural formula is presented as Ca3[CaZr]octa[Ge]tetraO12.


1987 ◽  
Vol 2 (4) ◽  
pp. 225-226
Author(s):  
Peter Bayliss ◽  
Slade St. J. Warne

AbstractMagnesium-chlorophoenicite may be differentiated from the Mn-analogue chlorophoenicite, because for magnesium-chlorophoenicite at 7Å, whereas for chlorophoenicite.In a review of the literature for the Mineral Powder Diffraction File by Bayliss et al. (1980), powder X-ray diffraction data could not be found of the mineral species magnesium-chlorophoenicite, (Mg,Mn)3Zn2(AsO4)(OH,O)6. Dunn (1981) states that the powder X-ray diffraction data of magnesium-chlorophoenicite is essentially identical to that of chlorophoenicite (Mn analogue) and confirms that the minerals are isostructural.With the crystal structure parameters determined by Moore (1968) for a Harvard University specimen from New Jersey of chlorophoenicite, a powder X-ray diffraction pattern was calculated with the programme of Langhof, Physikalische Chemie Institute, Darmstadt. The calculated pattern was used to correct and complete the indexing of the powder X-ray diffraction data of chlorophoenicite specimen ROM M15667 from Franklin, Sussex County, New Jersey, U.S.A. by the Royal Ontario Museum (PDF 25-1159). With the correctly indexed data of ROM M15667, the unitcell parameters were refined by least-squares analysis and are listed in Table 1.The most magnesium-rich magnesium-chlorophoenicite found in the literature is a description of Harvard University specimen 92803 from Franklin, Sussex County, New Jersey, U.S.A. by Dunn (1981), where Mg is slightly greater than Mn. A 114.6 mm Debye-Schemer film taken of HU92803 with Cu radiation and a Ni filter (CuKα = 1.5418Å) was obtained from Dr. P. Dunn and measured visually. The unit-cell parameters, which were refined by least-squares analysis starting from the unit-cell parameters of PDF 25-1159 in space group C2/m(#12), are listed in Table 1, and give F28 = 4.1(0.050,136) by the method of Smith & Snyder (1979).The hkl, dcalulated, dobserved and relative intensities (I/I1) of HU92803 are presented in Table 2. With the atomic positions and temperature factors of chlorophoenicite determined by Moore (1968), the Mn atomic positions occupied by 50% Mg and 50% Mn, and the unit-cell parameters of HU92803, a powder X-ray diffraction pattern was calculated and Icalculated is recorded in Table 2. A third powder X-ray diffraction pattern was calculated with the Mn atomic positions fully occupied by Mg. Because the atomic scattering factor of Mn is more than twice greater than Mg, chlorophoenicite may be differentiated from magnesium-chlorophoenicite based upon the calculated intensities of the first three reflections given in Table 3.Although the a, c and β unit-cell parameters of chlorphoenicite are similar to those of magnesium-chlorphoenicite, the b unit-cell parameter of chlorophoenicite is significantly greater than that of magnesium-chlorophoenicite (Table 1). The b unit-cell parameter represents the 0–0 distance of the Mn octahedra (Moore, 1968). Since the size of Mn is greater than that of Mg, chlorophoenicite may be differentiated from magnesium-chlorophoenicite based upon the b unit-cell parameter given in Table 1.American Museum of Natural History (New York, N.Y., U.S.A.) specimen 28942 from Sterling Hill, Ogdensburg, New Jersey is composed of willemite, haidingerite and magnesian chlorophoenicite. A spectrographic analysis of the magnesian chlorophoenicite shows As, Mg, Mn and Zn. Powder X-ray diffraction data (PDF 34-190) of the magnesian chlorophoenicite was collected by diffractometer with Cu radiation and a graphite 0002 monochromator (Kα1 = 1.5405) at a scanning speed of 0.125° 2θ per minute. The unit-cell parameters, which were refined by leastsquares analysis starting from the unit-cell parameters of PDF 25-1159, are given in Table 1. Specimen AM 28942 is called chlorophoenicite, because of its large b unit-cell parameter (Table 1), and the I/I1 of 25 for reflection 001 and of 50 for reflection 201 compared to the Icalculated in Table 3.


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