Faculty Opinions recommendation of Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics.

Author(s):  
Michael Hengartner
2003 ◽  
Vol 21 (8) ◽  
pp. 927-931 ◽  
Author(s):  
Jeroen Krijgsveld ◽  
René F Ketting ◽  
Tokameh Mahmoudi ◽  
Janik Johansen ◽  
Marta Artal-Sanz ◽  
...  

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Sabrina Dietz ◽  
Miguel Vasconcelos Almeida ◽  
Emily Nischwitz ◽  
Jan Schreier ◽  
Nikenza Viceconte ◽  
...  

AbstractTelomeres are bound by dedicated proteins, which protect them from DNA damage and regulate telomere length homeostasis. In the nematode Caenorhabditis elegans, a comprehensive understanding of the proteins interacting with the telomere sequence is lacking. Here, we harnessed a quantitative proteomics approach to identify TEBP-1 and TEBP-2, two paralogs expressed in the germline and embryogenesis that associate to telomeres in vitro and in vivo. tebp-1 and tebp-2 mutants display strikingly distinct phenotypes: tebp-1 mutants have longer telomeres than wild-type animals, while tebp-2 mutants display shorter telomeres and a Mortal Germline. Notably, tebp-1;tebp-2 double mutant animals have synthetic sterility, with germlines showing signs of severe mitotic and meiotic arrest. Furthermore, we show that POT-1 forms a telomeric complex with TEBP-1 and TEBP-2, which bridges TEBP-1/-2 with POT-2/MRT-1. These results provide insights into the composition and organization of a telomeric protein complex in C. elegans.


2020 ◽  
Author(s):  
Sabrina Dietz ◽  
Miguel Vasconcelos Almeida ◽  
Emily Nischwitz ◽  
Jan Schreier ◽  
Nikenza Viceconte ◽  
...  

AbstractTelomeres are bound by dedicated protein complexes, like shelterin in mammals, which protect telomeres from DNA damage. In the nematode Caenorhabditis elegans, a comprehensive understanding of the proteins interacting with the telomere sequence is lacking. Here, we harnessed a quantitative proteomics approach to screen for proteins binding to C. elegans telomeres, and identified TEBP-1 and TEBP-2, two paralogs that associate to telomeres in vitro and in vivo. TEBP-1 and TEBP-2 are expressed in the germline and during embryogenesis. tebp-1 and tebp-2 mutants display strikingly distinct phenotypes: tebp-1 mutants have longer telomeres than wild-type animals, while tebp-2 mutants display shorter telomeres and a mortal germline, a phenotype characterized by transgenerational germline deterioration. Notably, tebp-1; tebp-2 double mutant animals have synthetic sterility, with germlines showing signs of severe mitotic and meiotic arrest. TEBP-1 and TEBP-2 form a telomeric complex with the known single-stranded telomere-binding proteins POT-1, POT-2, and MRT-1. Furthermore, we find that POT-1 bridges the double- stranded binders TEBP-1 and TEBP-2, with the single-stranded binders POT-2 and MRT-1. These results describe the first telomere-binding complex in C. elegans, with TEBP-1 and TEBP-2, two double-stranded telomere binders required for fertility and that mediate opposite telomere dynamics.


2009 ◽  
Vol 8 (10) ◽  
pp. 2227-2242 ◽  
Author(s):  
Lily Ting ◽  
Mark J. Cowley ◽  
Seah Lay Hoon ◽  
Michael Guilhaus ◽  
Mark J. Raftery ◽  
...  

The Analyst ◽  
2014 ◽  
Vol 139 (10) ◽  
pp. 2312-2317 ◽  
Author(s):  
Fanghao Hu ◽  
Lu Wei ◽  
Chaogu Zheng ◽  
Yihui Shen ◽  
Wei Min

High-resolution imaging of choline metabolites in living mammalian cells, primary neurons andC. eleganshas been demonstrated with the potential forin vivodisease detection and developmental monitoring.


2011 ◽  
Vol 8 (10) ◽  
pp. 845-847 ◽  
Author(s):  
Julius Fredens ◽  
Kasper Engholm-Keller ◽  
Anders Giessing ◽  
Dennis Pultz ◽  
Martin Røssel Larsen ◽  
...  

2012 ◽  
Vol 11 (3) ◽  
pp. 1582-1590 ◽  
Author(s):  
Zhou Li ◽  
Rachel M. Adams ◽  
Karuna Chourey ◽  
Gregory B. Hurst ◽  
Robert L. Hettich ◽  
...  

2007 ◽  
Vol 6 (5) ◽  
pp. 860-881 ◽  
Author(s):  
Edward L. Huttlin ◽  
Adrian D. Hegeman ◽  
Amy C. Harms ◽  
Michael R. Sussman

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