Faculty Opinions recommendation of Domain-domain interactions in full-length p53 and a specific DNA complex probed by methyl NMR spectroscopy.

Author(s):  
Gottfried Otting
Biochemistry ◽  
1995 ◽  
Vol 34 (27) ◽  
pp. 8542-8553 ◽  
Author(s):  
H. Peter Spielmann ◽  
David E. Wemmer ◽  
Jens Peter Jacobsen

2001 ◽  
Vol 57 (3) ◽  
pp. 421-424 ◽  
Author(s):  
Julian P. Vivian ◽  
Jackie A. Wilce ◽  
Adam F. Hastings ◽  
Matthew C. J. Wilce
Keyword(s):  

Blood ◽  
2010 ◽  
Vol 115 (8) ◽  
pp. 1640-1649 ◽  
Author(s):  
Wouter Pos ◽  
James T. B. Crawley ◽  
Rob Fijnheer ◽  
Jan Voorberg ◽  
David A. Lane ◽  
...  

Abstract In the majority of patients with acquired thrombotic thrombocytopenic purpura (TTP), antibodies are directed toward the spacer domain of ADAMTS13. We have previously shown that region Y658-Y665 is involved. We now show that replacement of R660, Y661, or Y665 with alanine in ADAMTS13 reduced/abolished the binding of 2 previously isolated human monoclonal antibodies and polyclonal antibodies derived from plasma of 6 patients with acquired TTP. We investigated whether these residues also influenced cleavage of short von Willebrand factor (VWF) fragment substrate VWF115. An ADAMTS13 variant (R660A/Y661A/Y665A, ADAMTS13-RYY) showed a 12-fold reduced catalytic efficiency (kcat/Km) arising from greatly reduced (> 25-fold) binding, demonstrated by surface plasmon resonance. The influence of these residue changes on full-length VWF was determined with denaturing and flow assays. ADAMTS13-RYY had reduced activity in both, with proteolysis of VWF unaffected by autoantibody. Binding of ADAMTS13-RYY mutant to VWF was, however, similar to normal. Our results demonstrate that residues within Y658-Y665 of the ADAMTS13 spacer domain that are targeted by autoantibodies in TTP directly interact with a complementary exosite (E1660-R1668) within the VWF A2 domain. Residues R660, Y661, and Y665 are critical for proteolysis of short VWF substrates, but wider domain interactions also make important contributions to cleavage of full-length VWF.


2005 ◽  
Vol 12 (3) ◽  
pp. 451-456 ◽  
Author(s):  
Lars Briese ◽  
Andrea Preusser ◽  
Dieter Willbold

2006 ◽  
Vol 103 (7) ◽  
pp. 2115-2119 ◽  
Author(s):  
Dmitry B. Veprintsev ◽  
Stefan M. V. Freund ◽  
Antonina Andreeva ◽  
Stacey E. Rutledge ◽  
Henning Tidow ◽  
...  

Structure ◽  
2020 ◽  
Vol 28 (7) ◽  
pp. 830-846.e9
Author(s):  
Corey D. Seacrist ◽  
Georg Kuenze ◽  
Reece M. Hoffmann ◽  
Brandon E. Moeller ◽  
John E. Burke ◽  
...  

2020 ◽  
Vol 92 (14) ◽  
pp. 9666-9673 ◽  
Author(s):  
Arthur Hinterholzer ◽  
Vesna Stanojlovic ◽  
Christof Regl ◽  
Christian G. Huber ◽  
Chiara Cabrele ◽  
...  

2020 ◽  
Vol 295 (22) ◽  
pp. 7595-7607 ◽  
Author(s):  
Laura N. Jeffreys ◽  
Kamila J. Pacholarz ◽  
Linus O. Johannissen ◽  
Hazel M. Girvan ◽  
Perdita E. Barran ◽  
...  

The cytochrome P450 monooxygenase P450 BM3 (BM3) is a biotechnologically important and versatile enzyme capable of producing important compounds such as the medical drugs pravastatin and artemether, and the steroid hormone testosterone. BM3 is a natural fusion enzyme comprising two major domains: a cytochrome P450 (heme-binding) catalytic domain and a NADPH-cytochrome P450 reductase (CPR) domain containing FAD and FMN cofactors in distinct domains of the CPR. A crystal structure of full-length BM3 enzyme is not available in its monomeric or catalytically active dimeric state. In this study, we provide detailed insights into the protein-protein interactions that occur between domains in the BM3 enzyme and characterize molecular interactions within the BM3 dimer by using several hybrid mass spectrometry (MS) techniques, namely native ion mobility MS (IM-MS), collision-induced unfolding (CIU), and hydrogen-deuterium exchange MS (HDX-MS). These methods enable us to probe the structure, stoichiometry, and domain interactions in the ∼240 kDa BM3 dimeric complex. We obtained high-sequence coverage (88–99%) in the HDX-MS experiments for full-length BM3 and its component domains in both the ligand-free and ligand-bound states. We identified important protein interaction sites, in addition to sites corresponding to heme-CPR domain interactions at the dimeric interface. These findings bring us closer to understanding the structure and catalytic mechanism of P450 BM3.


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