Identification of regulatory genes to reduce N2O production

2014 ◽  
Vol 94 (6) ◽  
pp. 1033-1036 ◽  
Author(s):  
Steven D. Siciliano

Siciliano, S. D. 2014. Identification of regulatory genes to reduce N2O production. Can. J. Plant Sci. 94: 1033–1036. The production of nitrous oxide occurs predominantly by microbial activity. This microbial activity can be broadly sub-divided into denitrification, the sequential reduction of nitrate to nitrous oxide or dinitrogen gas, or into nitrification, the sequential oxidation of ammonia to nitrite. The consumption of nitrous oxide occurs by microbial activity as well, but only by a single pathway, i.e., the activity of nitrous oxide reductase (nos). The purpose of this investigation was to determine the dominant producer of nitrous oxide in our agricultural ecosystems, and then explore how these producers interacted with other biological and edaphic factors to regulate overall nitrous oxide production. Finally, we also investigated what controlled nitrous oxide consumption in these agricultural ecosystems. Much to our surprise, the dominant production of nitrous oxide in these upland agricultural soils occurred by nitrification, likely the nitrification-denitrification pathway. In addition, a root exudate, formate, was a large driver of nitrous oxide release via its interaction with the fungal biomass under micro-aerophilic conditions. Despite these unusual sources of production, what became apparent was that the net flux of nitrous oxide in an agricultural soil was linked to denitrifier consumption of nitrous oxide. In conclusion, this project found that there was a wide variety of non-bacterial denitrifier producers of nitrous oxide in an agricultural soil and that they interact not only between themselves but with the plant community. However, the net production of nitrous oxide in agricultural fields was still tightly linked to bacterial denitrification, but through the consumption of nitrous oxide by bacterial denitrifiers.

2010 ◽  
Vol 7 (2) ◽  
pp. 3019-3059 ◽  
Author(s):  
C. H. Frame ◽  
K. L. Casciotti

Abstract. Nitrous oxide (N2O) is a trace gas that contributes to greenhouse warming of the atmosphere and stratospheric ozone depletion. The N2O yield from nitrification (moles N2O-N produced/mole ammonium-N consumed) has been used to estimate marine N2O production rates from measured nitrification rates and global estimates of oceanic export production. However, the N2O yield from nitrification is not constant. Previous culture-based measurements indicate that N2O yield increases as oxygen (O2) concentration decreases and as nitrite (NO2−) concentration increases. These results were obtained in substrate-rich conditions and may not reflect N2O production in the ocean. Here, we have measured yields of N2O from cultures of the marine β-proteobacterium Nitrosomonas marina C-113a as they grew on low-ammonium (50 μM) media. These yields were lower than previous reports, between 4×10−4 and 7×10−4 (moles N/mole N). The observed impact of O2 concentration on yield was also smaller than previously reported under all conditions except at high starting cell densities (1.5×10


2020 ◽  
Vol 54 (4) ◽  
pp. 2556-2557
Author(s):  
Xiaotong Song ◽  
Xiaotang Ju ◽  
Cairistiona F.E. Topp ◽  
Robert M. Rees

PLoS ONE ◽  
2013 ◽  
Vol 8 (3) ◽  
pp. e60146 ◽  
Author(s):  
Xia Zhu ◽  
Lucas C. R. Silva ◽  
Timothy A. Doane ◽  
William R. Horwath

2012 ◽  
Vol 92 (2) ◽  
pp. 315-327 ◽  
Author(s):  
Kumudinie A. Kariyapperuma ◽  
Adriana Furon ◽  
Claudia Wagner-Riddle

Kariyapperuma, K. A., Furon, A. and Wagner-Riddle, C. 2012. Non-growing season nitrous oxide fluxes from an agricultural soil as affected by application of liquid and composted swine manure. Can. J. Soil Sci. 92: 315–327. Agricultural soils have been recognized as a significant source of anthropogenic nitrous oxide (N2O) emissions, an important greenhouse gas and contributor to stratospheric ozone destruction. Application of liquid swine manure (LSM) has been reported to increase direct N2O emissions from agricultural soils. Composting of LSM with straw under forced aeration has been suggested as a mitigation practice for emissions of N2O. In cold climates, up to 70% of total annual soil N2O emissions have been observed during winter and spring thaw. Non-growing season soil N2O emissions after field application of composted swine manure (CSM) versus LSM have not been directly compared in past studies. A 2-yr field experiment was conducted at the Arkell Research Station, Ontario, Canada, as a part of a larger study to evaluate composting as a mitigation strategy for greenhouse gases (GHGs). The objectives were to quantify and compare non-growing season N2O fluxes from agricultural soils after fall application of LSM and CSM. Nitrous oxide fluxes were measured using the flux-gradient method. Compared with LSM, CSM resulted in 57% reduction of soil N2O emissions during February to April in 2005, but emissions during the same period in 2006 were not affected by treatments. This effect was related to fall and winter weather conditions with the significant reduction occurring in the year when soil freezing was more pronounced. Compared with LSM, CSM resulted in a reduction of 37% (CO2-eq) of estimated N2O emissions per liter of treated manure and of 50% in the emission factor for the non-growing season.


2016 ◽  
Vol 75 (3) ◽  
pp. 491-500 ◽  
Author(s):  
Longqi Lang ◽  
Mathieu Pocquet ◽  
Bing-Jie Ni ◽  
Zhiguo Yuan ◽  
Mathieu Spérandio

The aim of this work is to compare the capability of two recently proposed two-pathway models for predicting nitrous oxide (N2O) production by ammonia-oxidizing bacteria (AOB) for varying ranges of dissolved oxygen (DO) and nitrite. The first model includes the electron carriers whereas the second model is based on direct coupling of electron donors and acceptors. Simulations are confronted to extensive sets of experiments (43 batches) from different studies with three different microbial systems. Despite their different mathematical structures, both models could well and similarly describe the combined effect of DO and nitrite on N2O production rate and emission factor. The model-predicted contributions for nitrifier denitrification pathway and hydroxylamine pathway also matched well with the available isotopic measurements. Based on sensitivity analysis, calibration procedures are described and discussed for facilitating the future use of those models.


1990 ◽  
Vol 36 (11) ◽  
pp. 779-785 ◽  
Author(s):  
E. Fazzolari ◽  
A. Mariotti ◽  
J. C. Germon

Thirty-four bacterial isolates from an agricultural soil anaerobically preincubated in the presence of glucose were tested for their ability to reduce nitrate to ammonia or to denitrify in two different media: nitrate broth and a minimal medium enriched with glucose. Ten isolates were considered denitrifying bacteria and 7 were dissimilatory ammonia producers. Ammonia production by the isolate identified as Enterobacter amnigenus was quantified and attained 50% of 138 mg∙L−1 of added NO3− N. The dissimilatory character of this reduction was clearly confirmed by culturing this 15N-labeled bacterium in the presence of unlabeled nitrite. Nitrous oxide was produced at the same time as nitrite was reduced to ammonia. Increasing nitrate N levels from 48 to 553 mg∙L−1 in culture medium resulted in an increase in the level of nitrite produced and simultaneously a decrease in ammonia and nitrous oxide production. Key words: dissimilatory nitrate reduction, dissimilatory ammonia production, denitrification, Enterobacter amnigenus, 15N.


2011 ◽  
Vol 92 (1) ◽  
pp. 35-50 ◽  
Author(s):  
Guillaume Vilain ◽  
Josette Garnier ◽  
Céline Roose-Amsaleg ◽  
Patricia Laville

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