Isolation and characterization of yeasts capable of efficient utilization of hemicellulosic hydrolyzate as the carbon source

2015 ◽  
Vol 14 (3) ◽  
pp. 11605-11612 ◽  
Author(s):  
L.A. Cassa-Barbosa ◽  
R.E.L. Procópio ◽  
I.T.S.R. Matos ◽  
S.A. Filho
Author(s):  
Y. Murtala ◽  
B. C. Nwanguma ◽  
L. U. S. Ezeanyika

Background: Despite the banned on the use of dichlorodiphenyltrichloroethane (DDT) and other Persistent Organic Pollutants (POPs) by the Stockholm Convention for their toxicity, emerging shreds of evidence have indicated that DDT is, however, still in use in developing countries. This might increase the global burden of DDT contamination and its hazardous effects. Aim: This study focused on the isolation and characterization of p,p’-DDT-degrading bacterium from a tropical agricultural soil. Methodology: Standard isolation procedure was used for the screening and isolation of the strain. The 16S rRNA and phylogenetic analyses were used to identify the isolate and established protocols were followed to characterize the strain. Results: A new strain belonging to the genus Aeromonas was isolated from agricultural soil using minimal salt-p,p’-DDT enrichment medium. The 16S rRNA sequencing was used to identify the strain and the partial sequence was deposited in the NCBI GenBank as Aeromonas sp. Strain MY1. This mesophilic isolate was capable of utilizing up to 50 mgL-1 of p,p’-DDT as the sole carbon source at an optimum pH of 7.5 and optimum temperature of 35 °C within 120 h under aerobic conditions. Fe2+ (0.2 mgL-1) demonstrated a stimulatory effect on the p,p’-DDT degradation capacity by the strain MY1. However, Zn, Cu, Pb, Hg, Ag and Cr ions have demonstrated various patterns of inhibitory effect on the p,p’-DDT degradation capacity of the isolate at 0.2 mgL-1. The strain MY1 could be a promising candidate for the bioremediation of p,p’-DDT contaminant. Conclusion: Aeromonas sp. strain MY1 was capable of utilizing p,p’-DDT as a sole carbon source under aerobic conditions. The utilization capacity of the strain was influenced by some heavy metals. Fe was found to enhance the p,p’-DDT utilization capacity of the isolate at a lower concentration. While Zn, Cu, Pb, Hg, Ag and Cr showed various patterns of inhibitory effect.


2004 ◽  
Vol 98 (4) ◽  
pp. 306-308 ◽  
Author(s):  
Hiroshi Habe ◽  
Mieko Kanemitsu ◽  
Mizuki Nomura ◽  
Tetsuo Takemura ◽  
Kenichi Iwata ◽  
...  

2014 ◽  
Vol 1073-1076 ◽  
pp. 666-671
Author(s):  
Guang Chun Li ◽  
Chun Xiang Piao ◽  
Katsuhiko Saido ◽  
Seon Yong Chung

Biodegradation of the styrene trimer was investigated, and its degrading bacteria were screened and isolated. Complex bacteria ST (strain ST1 and ST2) was isolated from contaminated soil by polystyrene and named by strain ST1 and ST2. ST1 and ST2 were identified by 16S rDNA and classified byOchrobactrum intermediumsp. andPseudomonas aeruginosasp., respectively. Biodegradation experiments were performed in batch and styrene trimer was used as a sole carbon source. Isolated two bacteria were used as degrading microorganisms. Initial liquid phase concentration of the styrene trimer was 50 mg/L. 95% of the styrene trimer was degraded in 17 days by the complex strain ST. The concentration was analyzed by using GC. Metabolites of bacteria were analyzed and three kinds of products that were identified by GC/MS.


2015 ◽  
Vol 178 (1) ◽  
pp. 76-90 ◽  
Author(s):  
Sarah A. Lee ◽  
Lindsey J. Wrona ◽  
A. Bruce Cahoon ◽  
Jacob Crigler ◽  
Mark A. Eiteman ◽  
...  

1984 ◽  
Vol 30 (12) ◽  
pp. 1477-1481 ◽  
Author(s):  
Helmut König

A rod-shaped Gram-positive methanogenic bacterium was isolated from marshy soil. It uses H2 – CO2 as sole energy and carbon source. Optimal growth occurs around 40 °C. The cell wall contains pseudomurein. The G + C content of the DNA is about 32 mol%. The DNA – DNA homology values of the isolate with Methanobacterium bryantii strains M.o.H. and M.o.H.-G. are 53 and 7%, respectively. The isolate is considered to be a new species within the genus Methanobacterium and it was named Methanobacterium uliginosum.


2020 ◽  
Author(s):  
Rabia Saleem ◽  
Safia Ahmed

AbstractBeing a significant protein L-glutaminases discovers potential applications in various divisions running from nourishment industry to restorative and cure. It is generally disseminated in microbes, actinomycetes, yeast and organisms. Glutaminase is the principal enzyme that changes glutamine to glutamate. The samples were gathered from soil of Taxila, Wah Cantt and Quetta, Pakistan for the isolation of glutaminase producing bacteria. After primary screening, subordinate screening was done which includes multiple testification such as purification, observation of morphological characters and biochemical testing of bacterial strains along with 16S rRNA sequence homology testing. Five bacterial strains were selected showing glutaminase positive test in screening, enzyme production via fermentation and enzymatic and protein assays. Taxonomical characterization of the isolates identified them as Bacillus subtilis U1, Achromobacter xylosoxidans G1, Bacillus subtilis Q2, Stenotrophomonas maltophilia U3 and Alcaligenes faecalis S3. The optimization of different effectors such as incubation time, inducers, carbon source, pH, and nitrogen source were also put under consideration. There was slight difference among incubation of bacterial culture, overall, 36 hours of incubation time was the best for glutaminase production by all the strains. Optimal pH was around 9 in Achromobacter xylosoxidans G1 and Alcaligenes faecalis S3, pH 6 in Bacillus subtilis U1, pH 8 in Stenotrophomonas maltophilia U3, pH 6-8 in Bacillus subtilis Q2. Best glutaminase production was obtained at 37°C by Bacillus subtilis U1and Bacillus subtilis Q2, 30°C for Achromobacter xylosoxidans G1, Stenotrophomonas maltophilia U3 and 25°C by Alcaligenes faecalis S3. The carbon sources put fluctuated effects on activity of enzyme in such a way that glucose was the best carbon source for Bacillus subtilis U1and Bacillus subtilis Q2, Sorbitol for Achromobacter xylosoxidans G1 and Alcaligenes faecalis S3 while xylose was the best for Stenotrophomonas maltophilia U3. Yeast extract and Trypton were among good nitrogen sources for Achromobacter xylosoxidans G1 and of Bacillus subtilis U1 respectively. Glutamine was the best inducer for Bacillus subtilis Q2, Alcaligenes faecalis S3 and Stenotrophomonas maltophilia U3, while lysine for Achromobacter xylosoxidans G1 and glycine act as good inducer in case of Bacillus subtilis U1. After implementation of optimal conditions microbial L-glutaminase production can be achieved and the bacterial isolates have a great potential for production of glutaminase enzyme and their applications.


2021 ◽  
Vol 22 (11) ◽  
Author(s):  
Lenni Fitri ◽  
MOHAMMAD ADZANNIE BESSANIA ◽  
NADIA SEPTI ◽  
SUHARTONO SUHARTONO

Abstract. Fitri L, Bessania MA, Septi N, Suhartono S. 2021. Isolation and characterization of soil actinobacteria as cellulolytic enzyme producer from Aceh Besar, Indonesia. Biodiversitas 22: 5169-5180. Cellulolytic actinobacteria are cellulase-producing bacteria capable of degrading cellulose. This study aimed to isolate, characterize, evaluate the cellulolytic ability, and to determine physiological characterization of soil cellulolytic actinobacteria isolated from the Ujung Pancu area, Aceh Besar. Isolation of actinobacteria from soil samples was performed using serial dilution method on Yeast Malt Agar (YMA) medium. Morphological characterization was carried out by growing isolates on YMA, Oatmeal Agar (OA), and Yeast Starch Agar (YSA) media. Cellulolytic ability was determined by calculating the cellulolytic index (IS) on 1% carboxymethyl cellulose (CMC) medium after adding 0.1% congo red solution. Physiological characterization of cellulolytic actinobacteria tested in this study was salinity, pH, and carbon source in liquid Yeast Malt (liquid YM), and the growth was measured at a wavelength of 581nm. The results showed that a total of nine isolates of actinobacteria were isolated, which belonged to the genus Streptomyces. Cellulolytic test results showed that eight isolates had the ability to degrade cellulose. Isolates AUP-04, AUP-03, and AUP-01 had the highest cellulolytic index value. Physiological characterization results revealed that three isolates had different tolerances for salinity levels, pH, and types of carbon sources. AUP-03 isolate grew well at 10% salinity with an OD value of 0.88, isolate AUP-01 grew at 5% salinity with an OD value of 0.49, whereas isolate AUP-04 grew well on media that did not contain salinity. All three isolates grew well at pH 6 with OD values of 0.93, 1.12, and 1.27. AUP-03 and AUP-01 isolates grew well on media containing dextrose as carbon source with OD values of 0.154 and 0.17, respectively, while isolate AUP-04 grew well on glucose-containing media with an OD value of 0.22.


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