Phylogenetic analysis of S1 gene of infectious bronchitis virus reveals emergence of new genotype

Author(s):  
Sudhir Kumar Jain ◽  
Hemlata Jain ◽  
Megha Kadam Bedekar
2011 ◽  
Vol 55 (3) ◽  
pp. 451-458 ◽  
Author(s):  
Fang Yan ◽  
Yujun Zhao ◽  
Wenbin Yue ◽  
Yao J ◽  
Lihua Lv ◽  
...  

2011 ◽  
Vol 6 (3) ◽  
pp. e21-e22
Author(s):  
Fang Yan ◽  
Yujun Zhao ◽  
Wenbin Yue ◽  
J Yao ◽  
Lihua Lv ◽  
...  

2016 ◽  
Vol 6 ◽  
pp. 18-24 ◽  
Author(s):  
Hamzeh Nabavi ◽  
Vahid Karimi ◽  
Arash Ghalyanchilangeroudi ◽  
Saeed Shateri ◽  
Waleed Seger ◽  
...  

2003 ◽  
Vol 15 (4) ◽  
pp. 344-348 ◽  
Author(s):  
Chang-Won Lee ◽  
Deborah A. Hilt ◽  
Mark W. Jackwood

A universal primer set was developed that amplifies a region covering hypervariable region (HVR) 1 and HVR 2 in the S1 gene of the infectious bronchitis virus (IBV). The universality of this primer set was confirmed by testing the reference strains of different serotypes or variants of the IBV present in the United States. An approximately 450-bp region containing HVR 1 and HVR 2 of 7 untyped field isolates obtained in 1999 and 2000 was amplified. Direct sequencing followed by phylogenetic analysis on that region allowed us to type those field isolates that were not typable by reverse transcriptase–polymerase chain reaction (RT-PCR) and restriction fragment length polymorphism (RFLP). Furthermore, it was found that typing by phylogenetic analysis of that region correlates with virus neutralization results. Together with RT-PCR and RFLP, this method will serve as a fast typing method for IBV diagnosis.


Viruses ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 1045
Author(s):  
Hyuk-Chae Lee ◽  
Sol Jeong ◽  
Andrew Y. Cho ◽  
Kyu-Jik Kim ◽  
Jun-Young Kim ◽  
...  

Infectious bronchitis virus (IBV) was first identified in the 1930s and it imposes a major economic burden on the poultry industry. In particular, GI-19 lineage has spread globally and has evolved constantly since it was first detected in China. In this study, we analyzed S1 gene sequences from 60 IBVs isolated in South Korea. Two IBV lineages, GI-15 and GI-19, were identified in South Korea. Phylogenetic analysis suggested that there were six distinct subgroups (KM91-like, K40/09-like, and QX-like I to IV) of the South Korean GI-19 IBVs. Among them, QX-type III and IV subgroups, which are phylogenetically different from those reported in South Korea in the past, accounted for more than half of the total. Moreover, the phylogeographic analysis of the QX-like subgroups indicated at least four distinct introductions of GI-19 IBVs into South Korea during 2001–2020. The efficacy of commercialized vaccines against the recently introduced QX-like subgroups should be verified, and continuous international surveillance efforts and quarantine procedures should be enhanced to prevent the incursion of viruses.


1994 ◽  
Vol 34 (3) ◽  
pp. 327-338 ◽  
Author(s):  
Wang Li ◽  
Dave Junker ◽  
Lisa Hock ◽  
Elham Ebiary ◽  
Ellen W. Collisson

Sign in / Sign up

Export Citation Format

Share Document