scholarly journals SYNTHESIS AND STRUCTURE OF 4-(9-HYDROXY-1,4,7-TRIOXYNONYL)PHTHALONITRILE

2017 ◽  
Vol 60 (3) ◽  
pp. 15
Author(s):  
Alexandra S. Kuznetsova ◽  
Maksim V. Dmitriev ◽  
Alexander V. Zav’yalov ◽  
Oscar I. Koifman ◽  
Mikhail K. Islyaikin
Keyword(s):  
Water Molecule ◽  
Ethyl Acetate ◽  
Theoretical Calculations ◽  
Triethylene Glycol ◽  
Solvent Evaporation ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
Reduced Pressure ◽  
X Ray

4-(9-Hydroxy-1,4,7-trioxynonyl)phthalonitrile was prepared by reaction of 4-nitrophthalonitrile with triethylene glycol in dry DMSO in the presence of fresh-calcined fine milled K2CO3 at 60 °C for 12 hours. The reaction mixture was poured into cold distilled water and extracted by CH2Cl2. Then the crude product obtained after solvent evaporation was purified by column chromatography on silica gel using elution mixture of ethyl acetate : hexane (1:3) and after that end product was dried at reduced pressure at 80 oC for 4 h. The product was characterized by IR and 1Н NMR spectroscopies, mass-spectrometry, elemental analysis and X-ray diffraction data. In MALDI-TOF spectrum, two signals located at 299 [M+Na]+  and 315 [M+К]+ Da were detected. Conformity between the calculated isotopic distributions and those derived from experimental data proves these assignments. A colorless monocrystal suitable for X-Ray measurements was grown up by low temperature solvent evaporation from a solution of 4-(9-hydroxy-1,4,7-trioxynonyl)phthalonitrile in ethyl acetate. X-ray studying showed that this compound is a monohydrate of 4-(9-hydroxy-1,4,7-trioxynonil)phthalonitrile with a water molecule located in lateral chain. Four molecules of 4-(9-hydroxy-1,4,7-trioxynonil)phthalonitrile and four water molecules were founded to be located in one unit cell with formatting eight intermolecular hydrogen bonds. Hence triethylene glycol fragment forms a chelate-like cavity which is able to hold a water molecule or a cation of alkali metal. It was found that its structure is very similar to that optimized at DFT/B3LYP/6-31G(d,p) level. The some bond lengths of theoretical calculations are found to be greater than experiment data because of close intermolecular interactions in solid state.Forcitation:Kuznetsova A.S., Dmitriev M.V., Zav’yalov A.V., Koifman O.I., Islyaikin M.K. Synthesis and structure of 4-(9-hydroxy-1,4,7-trioxynonyl)phthalonitrile. Izv. Vyssh. Uchebn. Zaved. Khim. Khim. Tekhnol. 2017. V. 60. N 3. P. 15-21.

Crystal Structure of Calcium Picrate Pentahydrate: A New Eight-Coordinate Stereochemistry for [M(bidentate)2(unidentate)4]

1979 ◽  
Vol 32 (2) ◽  
pp. 301 ◽  
Author(s):  
V Diakiw ◽  
TW Hambley ◽  
DL Kepert ◽  
CL Raston ◽  
AH White
Keyword(s):  
Crystal Structure ◽  
Water Molecule ◽  
Single Crystal ◽  
Title Compound ◽  
Lattice Site ◽  
The Other ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
Triangular Face ◽  
X Ray

The crystal structure of the title compound, Ca(C6H2N307)2,5H2O, has been determined by single-crystal X-ray diffraction at 295(1) K and refined by least squares to a residual of 0.049 for 1513 'observed' reflections. Crystals are orthorhombic, Pmab, a 24.169(6), b l0.292(7), c 8.554(2) �, Z 4. The stereochemistry about the calcium has not been observed previously for the system [M(bidentate)2- (unidentate)4]; in the present structure, the calcium is coordinated by a pair of bidentate picrate ligands and the four water molecules in an array in which three of the water molecules occupy a triangular face of a square antiprism, the overall array having m symmetry. The remaining water molecule occupies a lattice site with no close interaction with the other species.

Synthesis, crystal structure, and vibrational spectra of the complex maleic acid•2H2O•18-crown-6

1990 ◽  
Vol 68 (12) ◽  
pp. 2183-2189 ◽  
Author(s):  
Pierre Audet ◽  
Rodrigue Savoie ◽  
Michel Simard
Keyword(s):  
Crystal Structure ◽  
Water Molecule ◽  
Maleic Acid ◽  
Water Molecules ◽  
Infrared And Raman Spectra ◽  
X Ray Diffraction ◽  
Monoclinic System ◽  
X Ray ◽  
O 18 ◽  
Stoichiometric Complex

A stoichiometric complex of formula maleic acid•2H2O•18-crown-6 has been obtained from maleic acid and the macrocyclic polyether 18-crown-6. Crystals of this complex have been shown by X-ray diffraction crystallography to belong to the Cc space group of the monoclinic system. The acid molecules in the adduct are linked to each other through a water molecule, giving infinite [-acid-H2O-]n chains. They are also linked to the crown ether via water molecules. The infrared and Raman spectra of the complex are presented and compared to those of crystalline maleic acid. Keywords: maleic acid/18-crown-6, structure, X-ray, spectra.

Etude structurale par diffraction des RX et spectroscopie IR des hydrates 10 et 8.4 Å de kaolinite

1999 ◽  
Vol 32 (5) ◽  
pp. 968-976 ◽  
Author(s):  
S. Jemai ◽  
A. Ben Haj Amara ◽  
J. Ben Brahim ◽  
A. Plançon
Keyword(s):  
Water Molecule ◽  
Octahedral Site ◽  
Ammonium Fluoride ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
Tetrahedral Sheet ◽  
X Ray ◽  
Octahedral Sites ◽  
Sheet Structure

Two hydrated kaolinites, characterized by 10 and 8.4 Å basal distances, were synthesized by treating the kaolinite KGa-1 with dimethyl sulfoxide (DMSO) and ammonium fluoride (NH4F). The X-ray diffraction study was based on a comparison between the experimental and calculated profiles. This study was conducted in two steps: firstly, the study of the 00lreflections enabled the determination of the stacking mode alongc*, the number of water molecules and their positions along the normal to the plane of the sheet structure; secondly, the study of thehkbands, withhand/ork≠ 0, enabled the determination of the stacking mode and the positions of the water molecules in the (a,b) plane. The 10 Å hydrated kaolinite is characterized by two water molecules per Al2Si2O5(OH)4unit, situated at 3 and 3.4 Å from the hydroxyl surface, over the octahedral sites. Two adjacent layers are translated with respect to each other, withT11= −0.38a− 0.37b+ 10n. The 8.4 Å hydrated kaolinite is characterized by one water molecule per Al2Si2O5(OH)4unit, situated at 2.4 Å from the hydroxyl surface and inserted between the vacant octahedral site and the ditrigonal cavity of the tetrahedral sheet. The corresponding interlayer shift isT11= −0.355a+ 0.35b+ 8.4n.

A Pyrazine-Bridged Ni(II) Coordination Polymer

2002 ◽  
Vol 57 (11) ◽  
pp. 1191-1194 ◽  
Author(s):  
Chirantan Roy Choudhury ◽  
Subrata Kumar Dey ◽  
Sutapa Sen ◽  
Bappaditya Bag ◽  
Samiran Mitra ◽  
...  
Keyword(s):  
Coordination Polymer ◽  
Chain Structure ◽  
Water Molecules ◽  
Polymeric Complex ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
X Ray ◽  
Elemental Analyses ◽  
Coordinated Water ◽  
Nitrate Anions

The single pyrazine-bridged polymeric complex {[Ni(pyz)(H2O)4](NO3)2.2H2O}n has been synthesised and characterised by elemental analyses, IR and UV-vis spectra, and a single-crystal X-ray diffraction study. The coordination around the Ni centre is perfectly octahedral. The Ni(H2O)4 coordination planes are bridged by pyrazine ligands forming an infinite chain structure. Two nitrate anions and two water molecules exist in the lattice and are linked by intermolecular hydrogen bonds to the coordinated water molecules.

scholarly journals Molecular and Crystal Structure of a Chitosan−Zinc Chloride Complex

Nanomaterials ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 1407
Author(s):  
Toshifumi Yui ◽  
Takuya Uto ◽  
Kozo Ogawa
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bonds ◽  
Theoretical Calculations ◽  
Chloride Complex ◽  
Fiber Axis ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
Chain Packing ◽  
X Ray ◽  
Packing Structure

We determined the molecular and packing structure of a chitosan–ZnCl2 complex by X-ray diffraction and linked-atom least-squares. Eight D-glucosamine residues—composed of four chitosan chains with two-fold helical symmetry, and four ZnCl2 molecules—were packed in a rectangular unit cell with dimensions a = 1.1677 nm, b = 1.7991 nm, and c = 1.0307 nm (where c is the fiber axis). We performed exhaustive structure searches by examining all of the possible chain packing modes. We also comprehensively searched the positions and spatial orientations of the ZnCl2 molecules. Chitosan chains of antiparallel polarity formed zigzag-shaped chain sheets, where N2···O6, N2···N2, and O6···O6 intermolecular hydrogen bonds connected the neighboring chains. We further refined the packing positions of the ZnCl2 molecules by theoretical calculations of the crystal models, which suggested a possible coordination scheme of Zn(II) with an O6 atom.

Unique Tetradentate Coordination of 2,2′-Bipyridyl-3,3′-Dicarboxylate (bpdc). Hydrothermal Synthesis and Crystal Structure of A Novel Polymeric Supramolecule [Co(bpdc)(H2O)2]n

2003 ◽  
Vol 56 (4) ◽  
pp. 335 ◽  
Author(s):  
Ben-Lai Wu ◽  
Hong-Quan Zhang ◽  
Hong-Yun Zhang ◽  
Qing-An Wu ◽  
Hong-Wei Hou ◽  
...  
Keyword(s):  
Title Complex ◽  
Water Molecules ◽  
Two Dimensional ◽  
X Ray Diffraction ◽  
Pyridyl Nitrogen ◽  
Intermolecular Hydrogen Bonds ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Polymeric Chains ◽  
Hydrothermal Methods

The title complex has been synthesized using hydrothermal methods and its structure determined by X-ray diffraction. It consists of polymeric chains of [Co(bpdc)(H2O)2] units (bpdc = 2,2′-bipyridyl-3,3′-dicarboxylate) which are linked by intermolecular hydrogen bonds to form two-dimensional layer-shaped supramolecules. Each bpdc ligand bridges two cobalt(II) centers in a rare tetradentate fashion through its two pyridyl nitrogen atoms chelating to one cobalt and two carboxyl oxygen atoms to the other in the equatorial plane. The octahedral coordination of cobalt is completed by two axial water molecules.

scholarly journals Crystal structure of bis[cis-(1,4,8,11-tetraazacyclotetradecane-κ4N)bis(thiocyanato-κN)chromium(III)] dichromate monohydrate from synchrotron X-ray diffraction data

2017 ◽  
Vol 73 (1) ◽  
pp. 72-75 ◽  
Author(s):  
Dohyun Moon ◽  
Masahiro Takase ◽  
Takashiro Akitsu ◽  
Jong-Ha Choi
Keyword(s):  
Crystal Structure ◽  
Three Dimensional ◽  
Complex Salt ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
Rotation Symmetry ◽  
X Ray ◽  
Dimensional Network ◽  
Distorted Octahedral

The structure of the complex salt,cis-[Cr(NCS)2(cyclam)]2[Cr2O7]·H2O (cyclam = 1,4,8,11-tetraazacyclotetradecane, C10H24N4), has been determined from synchrotron data. The asymmetric unit comprises of one [Cr(NCS)2(cyclam)]+cation, one half of a Cr2O72−anion (completed by inversion symmetry) and one half of a water molecule (completed by twofold rotation symmetry). The CrIIIion is coordinated by the four cyclam N atoms and by two N atoms ofcis-arranged thiocyanate anions, displaying a distorted octahedral coordination sphere. The Cr—N(cyclam) bond lengths are in the range 2.080 (2) to 2.097 (2) Å while the average Cr—N(NCS) bond length is 1.985 (4) Å. The macrocyclic cyclam moiety adopts thecis-V conformation. The bridging O atom of the dichromate anion is disordered around an inversion centre, leading to a bending of the Cr—O—Cr bridging angle [157.7 (3)°]; the anion has a staggered conformation. The crystal structure is stabilized by intermolecular hydrogen bonds involving the cyclam N—H groups and water O—H groups as donor groups, and the O atoms of the Cr2O72−anion and water molecules as acceptor groups, giving rise to a three-dimensional network.

scholarly journals Synthesis and crystal structure of peptide dimethyl biphenyl hybrid C52H60N6O10·0.25H2O

2020 ◽  
Vol 76 (10) ◽  
pp. 1675-1678
Author(s):  
Xuan Tu Nguyen ◽  
Thuy Quynh Le ◽  
Tra My Bui Thi ◽  
Dinh Hung Mac ◽  
Thai Thanh Thu Bui
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bonds ◽  
Water Molecule ◽  
Asymmetric Unit ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Peptide Molecule ◽  
Methoxycarbonyl Group

The synthesis and crystal structure of peptide 6,6′-dimethyl biphenyl hybrid are described. The title compound was synthesized by reaction between 6,6′-dimethyl-[1,1′-biphenyl]-2,2′-dicarbonyl dichloride in CH2Cl2, amine HN–proline–phenylalanine–alanine–COOMe and Et3N at 273 K under N2 atmosphere and characterized by single-crystal X-ray diffraction. The asymmetric unit contains one peptide molecule and a quarter of a water molecule. A disorder of a methyl and methoxycarbonyl group of one alanine residue is observed with occupancy ratio 0.502 (6):0.498 (6). The structure is consolidated by intra- and intermolecular hydrogen bonds.

scholarly journals The Structure and Properties of Fe(II) 1,10-Phenanthroline-Thiobarbiturate

2020 ◽  
pp. 479-488
Author(s):  
Nicolay N. Golovnev ◽  
Maxim S. Molokeev ◽  
Irina V. Sterkhova ◽  
Timur Yu. Ivanenko
Keyword(s):  
Thermal Analysis ◽  
Thiobarbituric Acid ◽  
Mononuclear Complex ◽  
Octahedral Complex ◽  
Water Molecules ◽  
Structure And Properties ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
X Ray ◽  
Bipy Molecule

The structure of the mononuclear complex [Fe(Bipy)(H2O)2(Htba)2]∙6H2O (I), where Bipy – 2,2’-dipyridine, H2tba – 2-thiobarbituric acid (C4H4N2O2S), was determined by single crystal X-ray diffraction technique (cif-file CCDC No. 1831367). Crystals I are rhombic: a = 17.4697 (7), b = 11.7738 (4), c = 13.4314 (5) Å, V = 2762.6(2) Å3, space group Pnma, Z = 4. Two nitrogen atoms of the Bipy molecule and two water molecules are located in the equatorial plane of the octahedral complex, and two S-coordinated Htba− ions the axial positions are occupied. The structure is stabilized by N−H∙∙∙O, O−H∙∙∙O, С−H∙∙∙O, C−H∙∙∙S intermolecular hydrogen bonds and π–π interaction between Bipy and Htba−. The compound is characterized by the methods of powder X-ray diffraction, thermal analysis, and IR spectroscopy

scholarly journals Pristine and hydrated fluoroapatite (0001)

2019 ◽  
Vol 75 (5) ◽  
pp. 830-838
Author(s):  
Xavier Torrelles ◽  
Immad M. Nadeem ◽  
Anna Kupka ◽  
Adrián Crespo-Villanueva ◽  
Sandrina Meis ◽  
...  
Keyword(s):  
Water Molecule ◽  
Experimental Analysis ◽  
Surface Coverage ◽  
Adsorbed Water ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
X Ray ◽  
Crystal Truncation Rod ◽  
Before And After ◽  
Dry Conditions

The surface structure of fluoroapatite (0001) (FAp0001) under quasi-dry and humid conditions has been probed with surface X-ray diffraction (SXRD). Lateral and perpendicular atomic relaxations corresponding to the FAp0001 termination before and after H2O exposure and the location of the adsorbed water molecules have been determined from experimental analysis of the crystal truncation rod (CTR) intensities. The surface under dry conditions exhibits a bulk termination with relaxations in the outermost atomic layers. The hydrated surface is formed by a disordered partially occupied H2O layer containing one water molecule (33% surface coverage) adsorbed at each of the three surface Ca atoms, and is coupled with one OH group randomly bonded to each of the three topmost P atoms with a 33% surface coverage.

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