scholarly journals Resistome diversity in cattle and the environment decreases during beef production

eLife ◽  
2016 ◽  
Vol 5 ◽  
Author(s):  
Noelle R Noyes ◽  
Xiang Yang ◽  
Lyndsey M Linke ◽  
Roberta J Magnuson ◽  
Adam Dettenwanger ◽  
...  

Antimicrobial resistant determinants (ARDs) can be transmitted from livestock systems through meat products or environmental effluents. The public health risk posed by these two routes is not well understood, particularly in non-pathogenic bacteria. We collected pooled samples from 8 groups of 1741 commercial cattle as they moved through the process of beef production from feedlot entry through slaughter. We recorded antimicrobial drug exposures and interrogated the resistome at points in production when management procedures could potentially influence ARD abundance and/or transmission. Over 300 unique ARDs were identified. Resistome diversity decreased while cattle were in the feedlot, indicating selective pressure. ARDs were not identified in beef products, suggesting that slaughter interventions may reduce the risk of transmission of ARDs to beef consumers. This report highlights the utility and limitations of metagenomics for assessing public health risks regarding antimicrobial resistance, and demonstrates that environmental pathways may represent a greater risk than the food supply.

1964 ◽  
Vol 62 (3) ◽  
pp. 283-302 ◽  
Author(s):  

In 1961 and 1962 a Working Party of the Public Health Laboratory Service, in which twenty-two laboratories participated, investigated the occurrence of salmonellae in abattoirs, meat factories, butchers' shops and meat products, and their association with human infections.Thirty-two abattoirs were studied. Salmonellae were isolated from 930 (21%) of 4496 swabs of abattoir drains. There was great variation between different abattoirs, but in general salmonellae were found most frequently in those which slaughtered a high proportion of cattle and a low proportion of sheep; more sero-types were isolated from bacon factories than from abattoirs which slaughtered more than one species of animal. Of 11,347 tissue specimens collected at abattoirs, 218 (1·92%) yielded salmonellae.Drain swabs from butchers' shops were examined and 73 (6·5%) of 1117 swabs were positive. Meat and meat products were less commonly contaminated but 0·8% of 4127 samples yielded salmonellae.Salmonella typhimurium was the serotype isolated most frequently from all sources. It was often shown that the same serotypes or phage-types were occurring in abattoirs and in human cases in an area at the same time. In eight food-poisoning incidents, involving a total of 281 cases and excreters, there was convincing evidence that meat or a meat product was the vehicle of infection; in a further twenty-three incidents the organisms causing disease were isolated from sources which suggested that infection might have been meat-borne.The evidence collected suggests that cattle introduce salmonellae into abattoirs more often than other species of animals. The importance of pigs as a source of human infection is confirmed. Sheep are not a source of salmonella infection in man from meat and meat products, whereas meat from pigs, cattle and calves is a source of infection and is responsible for both sporadic cases and outbreaks of disease.We wish to thank the many medical officers of health who co-operated in this study. The public health inspectors and abattoir staffs who collected the specimens are too numerous to mention by name, but their invaluable assistance is most gratefully acknowledged. Among the medical officers who assisted us in the survey were: Dr A. Armit (Bridport M.B. and R.D.), Prof. D. B. Bradshaw (Leeds C.B.), Dr C. B. Crane (York C.B.), Dr J. Douglas (Bradford C.B.), Dr A. B. R. Finn (Guildford M.B.), Dr R. A. Good (Winchester M.B.), Dr G. B. Hopkins (Wimborne and Cranborne R.D.), Dr E. W. Kinsey (Caernarvon M.B.), Dr I. B. Lawrence (Dorchester M.B. and R.D.), Dr R. A. Leader (Ipswich C.B.), Dr Mary Lennox (Barry M.B.), Dr V. P. McDonagh (Keighley M.B.), Dr H. E. Nutten (Beccles M.B.), Dr G. O'Donnell (Worcester C.B.), Dr E. J. O'Keeffe (Wareham M.B. and Wareham and Purbeck R.D.), Dr N. F. Pearson (Sturminster Newton R.D.), Dr W. P. Phillips (Cardiff C.B.), Dr T. H. Pierce (Llandudno U.D.), Dr J. L. Rennie (Carlisle C.B.), Dr C. L. Sharp (Bedford M.B.), Dr E. F. Shennan (Evesham U.D.), Dr J. Stevenson-Logan (Southend-on-Sea C.B.), Dr D. W. Wauchob (Blackpool C.B.), Dr J. Walker (Lancashire C.C.), Dr J. V. Walker (Darlington C.B.), Dr R. B. Walker (Kingsbridge R.D.), Dr E. J. Gordon Wallace (Weymouth M.B.), Dr C. Robertson Wilson (Lancashire C.C.), Dr E. M. Wright (Salisbury M.B.), Dr Alfred Yarrow (South East Essex).


2013 ◽  
Vol 14 (2) ◽  
pp. 155-158 ◽  
Author(s):  
Shana Gillette

AbstractAs the demand for meat continues to grow in South Asia and Africa and access to communal sources of water and forage shrinks, intensification of small-scale livestock systems in peri-urban areas is expected to expand. In South East Asia, smallholder transition to livestock intensification has been transformative, increasing economic opportunities while also introducing new disease risks. While we have an understanding of the emerging disease burden from livestock intensification; we have just begun to understand the possible public health benefits of sustainable landscapes and the potential health savings accrued from disease avoidance. To date, few studies have attempted to quantify the health benefits attributable to sustainable agro-ecosystems, especially in regard to livestock systems. In this paper, I will examine what is needed to measure and communicate the public health benefits and cost-savings (from disease avoidance) of sustainable agro-ecosystems.


1994 ◽  
Vol 30 (9) ◽  
pp. 239-248 ◽  
Author(s):  
R. Armon ◽  
C. G. Dosoretz ◽  
Y. Azov ◽  
G. Shelef

Unrestricted crop irrigation with wastewater effluents is a major concern for public health. The aim of this investigation was to compare two wastewater effluent reservoirs used for irrigation of a variety of vegetables. The study covers the period from January to the end of July, with sprinkle irrigation starting in mid-April. Lettuce, parsley, cabbage, onion, carrots, fennel, radish and tomato irrigated with highly polluted effluents, displayed elevated numbers of indicator microorganisms. In contrast, vegetables irrigated with slightly polluted effluents, showed significantly lower numbers of indicator microorganisms. Although a low background of microbial indicators was detected in both cases before irrigation started, a significant increase of residual contamination was observed on vegetables irrigated with the polluted effluents, following the irrigation onset in mid-April. Independently of the need to correlate quality standards for unrestricted crop irrigation with epidemiological data, irrigation with poorly managed wastewater, based on microbiological and chemical parameters, results in highly contaminated vegetables. Vegetables often eaten raw or with rich dressings (which may result in regrowth of some pathogenic bacteria) may threaten the public health, without clear outbreaks. It must be borne in mind that drinking water that does not differ much from these vegetables in the way of consumption, has very restrictive quality standards. Similar restrictive standards should be applied for vegetables irrigated with reused water. The results of this study strongly suggest the necessity to treat wastewater effluents to an extent in which no residual contaminants will be detected on irrigated crops.


2013 ◽  
Vol 76 (2) ◽  
pp. 256-264 ◽  
Author(s):  
NORASAK KALCHAYANAND ◽  
TERRANCE M. ARTHUR ◽  
JOSEPH M. BOSILEVAC ◽  
DAYNA M. BRICHTA-HARHAY ◽  
STEVEN D. SHACKELFORD ◽  
...  

The incidence of Clostridium difficile infection has recently increased in North American and European countries. This pathogen has been isolated from retail pork, turkey, and beef products and reported associated with human illness. This increase in infections has been attributed to the emergence of a toxigenic strain designated North America pulsed-field gel electrophoresis type 1 (NAP1). The NAP1 strain has been isolated from calves as well as ground meat products, leading to speculation of illness from consumption of contaminated meat products. However, information on C. difficile associated with beef cattle during processing and commercially produced ground beef is limited. To address this data gap, samples from various steps during beef production were collected. Samples from hides (n = 525), preevisceration carcasses (n = 475), postintervention carcasses (n = 471), and 956 commercial ground beef samples were collected from across the United States. The prevalence of C. difficile spores on hides was 3.2%. C. difficile spores were not detected on preevisceration and postintervention carcasses or in commercially produced ground beef. Phenotypic and genetic characterizations were carried out for all 18 isolates collected from hide samples. Twenty-two percent of the isolates were nontoxigenic strains, while 78% of the isolates were toxigenic. Toxinotyping and PCR ribotyping patterns revealed that 6 and 33% of the isolates were identified as NAP1 and NAP7 strains, respectively. This article evidences that the prevalence of C. difficile, specifically pathogenic strains, in the U.S. beef production chain is low.


Author(s):  
Lois M. Davis ◽  
Nancy Nicosia ◽  
Adrian Overton ◽  
Lisa Miyashiro ◽  
Kathryn Pitkin Derose ◽  
...  

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