ompf porin
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Author(s):  
Sol Vendrell-Fernández ◽  
Paloma Lozano-Picazo ◽  
Paula Cuadros-Sánchez ◽  
María M. Tejero-Ojeda ◽  
Rafael Giraldo
Keyword(s):  

2021 ◽  
Vol 188 ◽  
pp. 105954
Author(s):  
Swati Aggarwal ◽  
Claes von Wachenfeldt ◽  
Suzanne Zoë Fisher ◽  
Esko Oksanen

2021 ◽  
Vol 150 ◽  
pp. 104694
Author(s):  
Olga Portnyagina ◽  
Dmitry Chistyulin ◽  
Sergey Dyshlovoy ◽  
Viktoriya Davidova ◽  
Valentina Khomenko ◽  
...  

2020 ◽  
Vol 142 (28) ◽  
pp. 12157-12166
Author(s):  
Sejeong Lee ◽  
Nicholas G. Housden ◽  
Sandra A. Ionescu ◽  
Matthew H. Zimmer ◽  
Renata Kaminska ◽  
...  
Keyword(s):  

Acta Naturae ◽  
2019 ◽  
Vol 11 (3) ◽  
pp. 89-98
Author(s):  
D. K. Chistyulin ◽  
O. D. Novikova ◽  
E. A. Zelepuga ◽  
V. A. Khomenko ◽  
G. N. Likhatskaya ◽  
...  

Electrophysiological experiments on bilayer lipid membranes showed that the isolated outer membrane major porin of Yersinia ruckeri (YrOmpF) exhibits activity typical of porins from Gram-negative bacteria, forming channels with a mean conductance of 230 pS (in 0.1 M KCl) and slight asymmetry with respect to the applied voltage. Under acidic conditions (up to pH = 3.0), there was no significant decrease in the total conductance of the YrOmpF channel reconstituted into the bilayer. The studied channel significantly differed from the porins of other bacteria by high values of its critical closing potential (Vc): Vc = 232 mV at pH = 7.0 and Vc = 164 mV at pH = 5.0. A theoretical model of the YrOmpF spatial structure was used for the analysis of the charge distribution in the mouth and inside the channel to explain these properties and quantitatively assess the bonds between the amino acid residues in the L3 loop and on the inner wall of the barrel. The parameters of YrOmpF were compared with those of the classical OmpF porin from E. coli. The results of electrophysiological experiments and theoretical analysis are discussed in terms of the mechanism for voltage-dependent closing of porin channels.


2019 ◽  
Vol 84 (6) ◽  
pp. 672-685
Author(s):  
V. A. Khomenko ◽  
E. V. Sidorin ◽  
S. I. Bakholdina ◽  
G. A. Naberezhnykh ◽  
N. Yu. Kim ◽  
...  

2018 ◽  
Vol 123 (1) ◽  
pp. 86-94 ◽  
Author(s):  
Juan Carlos Ahumada ◽  
Carlos Alemán ◽  
Jorge Soto-Delgado ◽  
Juan Torras
Keyword(s):  

2018 ◽  
Vol 19 (10) ◽  
pp. 2988
Author(s):  
Nina Sanina ◽  
Natalia Chopenko ◽  
Andrey Mazeika ◽  
Ludmila Davydova ◽  
Galina Leonova ◽  
...  

Tick-borne encephalitis (TBE) is a widespread, dangerous infection. Unfortunately, all attempts to create safe anti-TBE subunit vaccines are still unsuccessful due to their low immunogenicity. The goal of the present work was to investigate the immunogenicity of a recombinant chimeric protein created by the fusion of the EIII protein, comprising domain III and a stem region of the tick-borne encephalitis virus (TBEV) E protein, and the OmpF porin of Yersinia pseudotuberculosis (OmpF-EIII). Adjuvanted antigen delivery systems, the tubular immunostimulating complexes (TI-complexes) based on the monogalactosyldiacylglycerol from different marine macrophytes, were used to enhance the immunogenicity of OmpF-EIII. Also, the chimeric protein incorporated into the most effective TI-complex was used to study its protective activity. The content of anti-OmpF-EIII antibodies was estimated in mice blood serum by enzyme-linked immunosorbent assay (ELISA). To study protective activity, previously immunized mice were infected with TBEV strain Dal’negorsk (GenBank ID: FJ402886). The animal survival was monitored daily for 21 days. OmpF-EIII incorporated into the TI-complexes induced about a 30–60- and 5–10-fold increase in the production of anti-OmpF-EIII and anti-EIII antibodies, respectively, in comparison with the effect of an individual OmpF-EIII. The most effective vaccine construction provided 60% protection. Despite the dramatic effect on the specific antibody titer, the studied TI-complex did not provide a statistically significant increase in the protection of OmpF-EIII protein. However, our results provide the basis of the future search for approaches to design and optimize the anti-TBEV vaccine based on the OmpF-EIII protein.


2018 ◽  
Vol 44 (4) ◽  
pp. 424-430
Author(s):  
N. S. Buinovskaya ◽  
L. A. Balabanova ◽  
O. Yu. Portnyagina ◽  
O. D. Novikova ◽  
V. A. Rasskazov

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