repeated dna sequences
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Author(s):  
Paul Talbert ◽  
Steven Henikoff

Centromeres, the chromosomal loci where spindle fibers attach during cell division to segregate chromosomes, are typically found within satellite arrays in plants and animals. Satellite arrays have been difficult to analyze because they comprise megabases of tandem head-to-tail highly repeated DNA sequences. Much evidence suggests that centromeres are epigenetically defined by the location of nucleosomes containing the centromere-specific histone H3 variant cenH3, independently of the DNA sequences where they are located; however, the reason that cenH3 nucleosomes are generally found on rapidly evolving satellite arrays has remained unclear. Recently, long read sequencing technology has clarified the structures of satellite arrays and sparked rethinking of how they evolve, while new experiments and analyses have helped bring both understanding and further speculation about the role these highly repeated sequences play in centromere identification.


2020 ◽  
Author(s):  
Adele Mangelinck ◽  
Clement Coudereau ◽  
Regis Courbeyrette ◽  
Khalid Ouararhni ◽  
Ali Hamiche ◽  
...  

The histone variant H2A.J was previously shown to accumulate in senescent human fibroblasts with persistent DNA damage to promote inflammatory gene expression, but its mechanism of action was unknown. We show that H2A.J accumulation contributes to weakening the association of histone H1 to chromatin and increasing its turnover. Decreased H1 in senescence is correlated with increased expression of some repeated DNA sequences, increased expression of STAT/IRF transcription factors, and transcriptional activation of Interferon-Stimulated Genes (ISGs). The H2A.J-specific Val-11 moderates the transcriptional activity of H2A.J, and H2A.J-specific Ser-123 can be phosphorylated in response to DNA damage with potentiation of its transcriptional activity by the phospho-mimetic S123E mutation. Our work demonstrates the functional importance of H2A.J-specific residues and potential mechanisms for its function in promoting inflammatory gene expression in senescence.


2019 ◽  
Vol 19 (S1) ◽  
Author(s):  
Nadezhda L. Bolsheva ◽  
Nataliya V. Melnikova ◽  
Ilya V. Kirov ◽  
Alexey A. Dmitriev ◽  
George S. Krasnov ◽  
...  

PLoS ONE ◽  
2018 ◽  
Vol 13 (3) ◽  
pp. e0195054 ◽  
Author(s):  
Alexandr Sember ◽  
Jörg Bohlen ◽  
Vendula Šlechtová ◽  
Marie Altmanová ◽  
Šárka Pelikánová ◽  
...  

2015 ◽  
Vol 290 (43) ◽  
pp. 26259-26269 ◽  
Author(s):  
Piera Cilli ◽  
Anna Minoprio ◽  
Cecilia Bossa ◽  
Margherita Bignami ◽  
Filomena Mazzei

ChemBioChem ◽  
2015 ◽  
Vol 16 (4) ◽  
pp. 549-554 ◽  
Author(s):  
Karine Nozeret ◽  
François Loll ◽  
Christophe Escudé ◽  
Alexandre S. Boutorine

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