Assessing the Economic Viability of the Mechanized Removal of Understory Beech during a Shelterwood Harvest

Beech bark disease is a pathogenic complex that has been spreading throughout the American beech’s range since the 1800s. A litany of negative consequences have manifested from the infestation of this disease, many of which deteriorate the ecological functions of forestland. This case study sought to analyze the cost structure for removing a recalcitrant beech understory via mechanized shelterwood harvesting. High-resolution data regarding the day-to-day operation of harvesting equipment was collected using daily production journals. Interviews were conducted with the logging company owner and maintenance supervisor to gather additional information required to calculate machine costs, overhead, job specific costs, and trucking costs. The yield from this harvest was 527 metric tonnes of sawtimber and 4,893 tonnes of clean chips. The total harvesting cost equated to $4,651/ha, with the cost attributed to removing beech at $204/ha. Despite the additional cost of beech removal, the logger generated a total profit of $5,965 and a return on investment of 7.5%, allowing us to conclude that mechanized harvesting can be a viable beech removal strategy given the forest stocking and market conditions that are in place. Study Implications This study breaks down the various costs associated with cutting, skidding, landing, and transporting wood products from a mechanized harvesting operation designed to remediate the effects of beech bark disease. The beech remediation harvest was economically viable for both the landowner and the logger because the timber sale included some valuable hardwood sawtimber, and the harvest system was capable of generating clean chips for a pulp mill with the low-grade hardwood. Furthermore, the landowner’s willingness to accept lower sawtimber stumpage revenues allowed the logger to make a profit and return-on-investment on the job. Had the timber sale been limited to only hardwood pulpwood or fuel chips, the operation would not have been economically viable without the landowner paying for the operation, which, based on our analysis, would be approximately $200/ha.

Pathogen and Endophyte Assemblages Co-vary With Beech Bark Disease Progression, Tree Decline, and Regional Climate

Plant–pathogen interactions are often considered in a pairwise manner with minimal consideration of the impacts of the broader endophytic community on disease progression and/or outcomes for disease agents and hosts. Community interactions may be especially relevant in the context of disease complexes (i.e., interacting or functionally redundant causal agents) and decline diseases (where saprobes and weak pathogens synergize the effects of primary infections and hasten host mortality). Here we describe the bark endophyte communities associated with a widespread decline disease of American beech, beech bark disease (BBD), caused by an invasive scale insect (Cryptococcus fagisuga) and two fungal pathogens, Neonectria faginata and N. ditissima. We show that the two primary fungal disease agents co-occur more broadly than previously understood (35.5% of infected trees), including within the same 1-cm diameter phloem samples. The two species appear to have contrasting associations with climate and stages of tree decline, wherein N. faginata was associated with warmer and N. ditissima with cooler temperatures. Neonectria ditissima showed a positive association with tree crown dieback – no such association was observed for N. faginata. Further, we identify fungal endophytes that may modulate disease progression as entomopathogens, mycoparasites, saprotrophs, and/or additional pathogens, including Clonostachys rosea and Fusarium babinda. These fungi may alter the trajectory of disease via feedbacks with the primary disease agents or by altering symptom expression or rates of tree decline across the range of BBD.

Influence of individual tree characteristics, spatial structure and logging history on tree-related microhabitat occurrence in North American hardwood forests

Background Tree-related microhabitats (hereafter, “TreMs”) are key components of forest biodiversity but they are still poorly known in North American hardwood forests. The spatial patterns of living trees bearing TreMs (hereafter, “TreM-trees”) also remain to be determined. As logging practices can lead to a loss of TreM-trees and of their associated biodiversity, it is essential to identify the factors explaining TreM occurrence to better integrate them into forest management. We therefore inventoried TreMs in 4 0.5-ha survey strips in northern hardwood forests in Quebec, Canada, while recording the spatial location of each tree. Two strips were located in unmanaged old-growth forests, and 2 were in forests managed under selection cutting. All 4 stands were dominated by sugar maple (Acer saccharum Marsh.) and American beech (Fagus grandifolia Ehrn.). Beech bark disease, an exotic pathology, was observed in all the strips. Results Large diameter at breast height and low tree vigor were the main characteristics explaining the presence of TreMs at the tree scale. TreM-trees presented slight spatial aggregation patterns. These aggregates, however, were not well-defined and were generally constituted by a large number of trees bearing few different types of TreMs. Two TreM classes (broken branch or top and woodpecker lodge) also presented a spatial aggregation. Logging practices had no significant effect on TreM occurrence. Beech bark disease increased the frequency of senescent beeches. The impact of this pathology on TreMs was however mitigated by the small size of infected trees and probably by the short time elapsed since its appearance. Conclusion The factors explaining the presence and abundance of TreMs on trees has so far been little studied in North American hardwood forests. Our results highlight that TreM-tree characteristics in the surveyed forests are consistent with those of previous studies conducted in other forest types and regions (e.g., Europe or Northwestern America). To our knowledge, this study is also the first to identify a spatial aggregation of TreM-trees and of specific TreM classes. It will be nevertheless necessary to determine whether the small impact of logging activities we observed results from current or past management practices.

Comparative genome analyses suggest a hemibiotrophic lifestyle and virulence differences for the beech bark disease fungal pathogens Neonectria faginata and Neonectria coccinea

Neonectria faginata and Neonectria coccinea are the causal agents of the insect-fungus disease complex known as beech bark disease (BBD), known to cause mortality in beech forest stands in North America and Europe. These fungal species have been the focus of extensive ecological and disease management studies, yet less progress has been made toward generating genomic resources for both micro- and macro-evolutionary studies. Here, we report a 42.1 and 42.7 mb highly contiguous genome assemblies of N. faginata and N. coccinea, respectively, obtained using Illumina technology. These species share similar gene number counts (12,941 and 12,991) and percentages of predicted genes with assigned functional categories (64 and 65%). Approximately 32% of the predicted proteomes of both species are homologous to proteins involved in pathogenicity, yet N. coccinea shows a higher number of predicted mitogen-activated protein kinase genes, virulence determinants possibly contributing to differences in disease severity between N. faginata and N. coccinea. A wide range of genes encoding for carbohydrate-active enzymes capable of degradation of complex plant polysaccharides and a small number of predicted secretory effector proteins, secondary metabolite biosynthesis clusters and cytochrome oxidase P450 genes were also found. This arsenal of enzymes and effectors correlates with, and reflects, the hemibiotrophic lifestyle of these two fungal pathogens. Phylogenomic analysis and timetree estimations indicated that the N. faginata and N. coccinea species divergence may have occurred at ∼4.1 million years ago. Differences were also observed in the annotated mitochondrial genomes as they were found to be 81.7 kb (N. faginata) and 43.2 kb (N. coccinea) in size. The mitochondrial DNA expansion observed in N. faginata is attributed to the invasion of introns into diverse intra- and intergenic locations. These first draft genomes of N. faginata and N. coccinea serve as valuable tools to increase our understanding of basic genetics, evolutionary mechanisms and molecular physiology of these two nectriaceous plant pathogenic species.

Pathogen and endophyte assemblages co-vary with beech bark disease progression, tree decline, and regional climate

Plant-pathogen interactions are often considered in a pairwise manner with minimal consideration of the impacts of the broader endophytic community on disease progression and/or outcomes for disease agents and hosts. Community interactions may be especially relevant in the context of disease complexes (i.e, interacting or functionally redundant causal agents) and decline diseases (where saprobes and weak pathogens synergize the effects of primary infections and hasten host mortality). Here we describe the bark endophyte communities associated with a widespread decline disease of American beech, beech bark disease (BBD), caused by an invasive scale insect (Cryptococcus fagisuga) and two fungal pathogens, Neonectria faginata and N. ditissima. We show that the two primary fungal disease agents co-occur more broadly than previously understood (35.5% of infected trees), including within the same 1-cm diameter phloem samples. The two species appear to have contrasting associations with climate and stages of tree decline, wherein N. faginata was associated with warmer and N. ditissima with cooler temperatures. Neonectria ditissima showed a positive association with tree crown dieback – no such association was observed for N. faginata. Further, we identify fungal endophytes that may modulate disease progression as entomopathogens, mycoparasites, saprotrophs and/or additional pathogens, including Clonostachys rosea and Fusarium babinda. These fungi may alter the trajectory of disease via feedbacks with the primary disease agents or by altering symptom expression or rates of tree decline across the range of BBD.

Resolving host and species boundaries for perithecia-producing nectriaceous fungi across the central Appalachian Mountains

The Nectriaceae contains numerous canker pathogens. Due to scarcity of ascomata on many hosts, comprehensive surveys are lacking. Here we characterize the diversity of perithecia-producing nectriaceous fungi across the central Appalachians. Ten species from twelve hosts were recovered including a novel Corinectria sp. from Picea rubens. Neonectria ditissima and N. faginata were most abundant and associated with Fagus grandifolia with beech bark disease (BBD). N. ditissima was also recovered from additional cankered hardwoods, including previously unreported Acer spicatum, Ilex mucronata, and Sorbus americana. Cross-pathogenicity inoculations of N. ditissima confirmed susceptibility of Acer and Betula spp. Neonectria magnoliae was recovered from cankered Liriodendron tulipifera and Magnolia fraseri and pathogenicity on L. tulipifera was confirmed. Fusarium babinda was consistently recovered from beech with BBD, although its role remains unclear. This survey provides a contemporary snapshot of Nectriaceae diversity across the Appalachian Mountains. The following nomenclatural changes are proposed: Neonectria magnoliae comb. nov.