Lethal coalitionary attacks of chimpanzees (Pan troglodytes troglodytes) on gorillas (Gorilla gorilla gorilla) in the wild

Intraspecies violence, including lethal interactions, is a relatively common phenomenon in mammals. Contrarily, interspecies violence has mainly been investigated in the context of predation and received most research attention in carnivores. Here, we provide the first information of two lethal coalitionary attacks of chimpanzees (Pan troglodytes troglodytes) on another hominid species, western lowland gorillas (Gorilla gorilla gorilla), that occur sympatrically in the Loango National Park in Gabon. In both events, the chimpanzees significantly outnumbered the gorillas and victims were infant gorillas. We discuss these observations in light of the two most widely accepted theoretical explanations for interspecific lethal violence, predation and competition, and combinations of the two-intraguild predation and interspecific killing. Given these events meet conditions proposed to trigger coalitional killing of neighbours in chimpanzees, we also discuss them in light of chimpanzees’ intraspecific interactions and territorial nature. Our findings may spur further research into the complexity of interspecies interactions. In addition, they may aid in combining field data from extant models with the Pliocene hominid fossil record to better understand behavioural adaptations and interspecific killing in the hominin lineage.

Home range size in central chimpanzees (Pan troglodytes troglodytes) from Loango National Park, Gabon

Ranging behavior has been studied extensively in eastern (Pan troglodytes schweinfurthii) and western (P. t. verus) chimpanzees, but relatively little is known regarding home ranges of the other two subspecies (P. t. ellioti; P. t. troglodytes). In this study, we determined the home range size and space use of a habituated community (Rekambo) of central chimpanzees living in a habitat mosaic in Loango National Park, Gabon. Data on travel routes were collected during follows between January 2017 and April 2019 (N = 670,616 relocations, collected over 640 days and 5690 h of observation). We used three methods for calculating home range size (minimum convex polygon, kernel density estimation, and biased random bridges). We compare our estimates to those obtained from prior genetic and camera trap studies of the Rekambo community and contrast them with estimates from other chimpanzee communities of the four chimpanzee subspecies. Depending on the methodology used, the home range size of the Rekambo community ranged between 27.64 and 59.03 km2. The location of the center of the home range remained relatively stable over the last decade, while the overall size decreased. The Rekambo home range is, therefore, one of the largest documented so far for chimpanzees outside savannah-woodland habitats. We discuss several explanations, including the presence of savannah, interspecies competition, and intercommunity interactions.

Intercommunity interactions and killings in central chimpanzees (Pan troglodytes troglodytes) from Loango National Park, Gabon

Intercommunity competition in chimpanzees (Pan troglodytes) has been widely studied in eastern (P. t. schweinfurthii) and western (P. t. verus) communities. Both subspecies show hostility towards neighboring communities but differ in rates of lethal attacks and female involvement. However, relatively little is known about the territorial behavior of the two other subspecies, central (P. t. troglodytes) and Nigeria-Cameroon chimpanzees (P. t. ellioti). Here, we present the first insights into intercommunity interactions of individuals of a community of central chimpanzees living in the Loango National Park in Gabon. The presence of individuals of neighboring communities in the Rekambo home range was assessed using 27 camera traps. Information was compiled on intergroup interactions recorded before (2005–2016) and after (January 2017–June 2019) the habituation of the community. Individuals from neighboring communities entered the core area, where nine out of 16 recorded intercommunity encounters occurred. Males were the main participants in territorial patrols and intercommunity aggressions. Females were part of all six territorial patrols recorded and dependent offspring participated in five patrols. Females were involved in intercommunity aggression in five out of twelve recorded encounters in which there was visual contact between communities. While the intercommunity encounter rate was lower than that reported across most other long-term chimpanzee sites, the annual intercommunity killing rate was among the highest. These results suggest that the frequency of lethal attacks at Loango is comparable to that reported for the eastern subspecies. In contrast, female involvement in intercommunity interactions mirrors that of the western subspecies.

Hunting of mammals by central chimpanzees (Pan troglodytes troglodytes) in the Loango National Park, Gabon

The predation and consumption of animals are common behaviours in chimpanzees across tropical Africa. To date, however, relatively little is known concerning the hunting behaviour of central chimpanzees (Pan troglodytes troglodytes). Here, we provide the first direct observations of hunting behaviour by individuals of the newly habituated Rekambo community in the Loango National Park, Gabon. Over a period of 23 months (May 2017 to March 2019), we observed a total of 61 predation attempts on eight mammal species, including four monkey species. The two most frequently hunted species were two monkey species (Cercocebus torquatus,Cercopithecus nictitans), which are not hunted at other long-term field sites. The majority of predation events observed involved parties of an average of eight individuals, mainly adult males, with hunting success being higher with increasing numbers of participants. Hunting occurred all year round, but hunting rates increased in the dry season, the period of high fruit availability in the Loango National Park. These results are in line with the nutrient surplus hypothesis which explains seasonal variation in hunting behaviour in several populations of eastern chimpanzees (Pan troglodytes schweinfurthii: e.g., Mahale, Tanzania; Ngogo, Uganda). Finally, with a hunting frequency of 2.65 hunts per month, the Rekambo community had higher hunting rates than other sites (Bossou, Republic of Guinea; Kahuzi-Biega, Democratic Republic of Congo; Budongo, Uganda) where red colobus monkeys are also absent. We discuss these results and compare them to patterns at other long-term sites.

Identification of Structural Variation in Chimpanzees Using Optical Mapping and Nanopore Sequencing

Recent efforts to comprehensively characterize great ape genetic diversity using short-read sequencing and single-nucleotide variants have led to important discoveries related to selection within species, demographic history, and lineage-specific traits. Structural variants (SVs), including deletions and inversions, comprise a larger proportion of genetic differences between and within species, making them an important yet understudied source of trait divergence. Here, we used a combination of long-read and -range sequencing approaches to characterize the structural variant landscape of two additional Pan troglodytes verus individuals, one of whom carries 13% admixture from Pan troglodytes troglodytes. We performed optical mapping of both individuals followed by nanopore sequencing of one individual. Filtering for larger variants (>10 kbp) and combined with genotyping of SVs using short-read data from the Great Ape Genome Project, we identified 425 deletions and 59 inversions, of which 88 and 36, respectively, were novel. Compared with gene expression in humans, we found a significant enrichment of chimpanzee genes with differential expression in lymphoblastoid cell lines and induced pluripotent stem cells, both within deletions and near inversion breakpoints. We examined chromatin-conformation maps from human and chimpanzee using these same cell types and observed alterations in genomic interactions at SV breakpoints. Finally, we focused on 56 genes impacted by SVs in >90% of chimpanzees and absent in humans and gorillas, which may contribute to chimpanzee-specific features. Sequencing a greater set of individuals from diverse subspecies will be critical to establish the complete landscape of genetic variation in chimpanzees.

Avoidance of biological contaminants through sight, smell and touch in chimpanzees

Avoiding biological contaminants is a well-known manifestation of the adaptive system of disgust. In theory, animals evolved with such a system to prevent pathogen and parasite infection. Bodily products are human-universal disgust elicitors, but whether they also elicit avoidance behaviour in non-human primates has yet to be tested. Here, we report experimental evidence that potential exposure to biological contaminants (faeces, blood, semen), as perceived via multiple sensory modalities (visual, olfactory, tactile), might influence feeding decisions in chimpanzees ( Pan troglodytes troglodytes )—our closest phylogenetic relatives. Although somewhat mixed, our results do show increased latencies to feed, tendencies to maintain greater distances from contaminants and/or outright refusals to consume food in test versus control conditions. Overall, these findings are consistent with the parasite avoidance theory of disgust, although the presence of biological contaminants did not preclude feeding entirely. The avoidance behaviours observed hint at the origins of disgust in humans, and further comparative research is now needed.