Geographic Distribution and Phylogeny of Soricine Shrew-Borne Seewis Virus and Altai Virus in Russia

The discovery of genetically distinct hantaviruses (family Hantaviridae) in multiple species of shrews, moles and bats has revealed a complex evolutionary history involving cross-species transmission. Seewis virus (SWSV) is widely distributed throughout the geographic ranges of its soricid hosts, including the Eurasian common shrew (Sorex araneus), tundra shrew (Sorex tundrensis) and Siberian large-toothed shrew (Sorex daphaenodon), suggesting host sharing. In addition, genetic variants of SWSV, previously named Artybash virus (ARTV) and Amga virus, have been detected in the Laxmann’s shrew (Sorex caecutiens). Here, we describe the geographic distribution and phylogeny of SWSV and Altai virus (ALTV) in Asian Russia. The complete genomic sequence analysis showed that ALTV, also harbored by the Eurasian common shrew, is a new hantavirus species, distantly related to SWSV. Moreover, Lena River virus (LENV) appears to be a distinct hantavirus species, harbored by Laxmann’s shrews and flat-skulled shrews (Sorex roboratus) in Eastern Siberia and far-eastern Russia. Another ALTV-related virus, which is more closely related to Camp Ripley virus from the United States, has been identified in the Eurasian least shrew (Sorex minutissimus) from far-eastern Russia. Two highly divergent viruses, ALTV and SWSV co-circulate among common shrews in Western Siberia, while LENV and the ARTV variant of SWSV co-circulate among Laxmann’s shrews in Eastern Siberia and far-eastern Russia. ALTV and ALTV-related viruses appear to belong to the Mobatvirus genus, while SWSV is a member of the Orthohantavirus genus. These findings suggest that ALTV and ALTV-related hantaviruses might have emerged from ancient cross-species transmission with subsequent diversification within Sorex shrews in Eurasia.

PRIMORYE EARTHQUAKE on April 12, 2014, KP=11.9 (Far Eastern Russia)

The article presents instrumental and macroseismic data of the earthquake that occurred on April 12, 2014 in the Primorye Region of the Far Eastern Federal District of the Russian Federation. Primorye refers to areas with a weak of shallow seismic activity. This relatively small magnitude M=4.5 earthquake is a rare occurrence in this region. It caused a significant macroseismic effect over an unexpectedly large area. The highest seismic intensity as large as 5 degrees was observed in the settlements nearest to the epicenter – Mezhgorye, Krylovka and Maryanovka. 36 minutes after the main event, an aftershock was recorded with an epicenter 6.5 km southeast of the main shock location, felt by the inhabitants of the settlement of Krylovka. According to the data obtained, the focal mechanism of the earthquake might be treated as the strikeslip fault type with the nodal planes of the sublatitudinal and sublongitudinal extension. In view of tectonics, the earthquake and its aftershock epicenters might be related to a nameless NW striking fault located near Mezhgorye Settlement and linking the Krylovsky and Chernorechensky faults.

Are quasicrystals really so rare in the Universe?

Until 2009, the only known quasicrystals were synthetic, formed in the laboratory under highly controlled conditions. Conceivably, the only quasicrystals in the Milky Way, perhaps even in the Universe, were the ones fabricated by humans, or so it seemed. Then came the report that a quasicrystal with icosahedral symmetry had been discovered inside a rock recovered from a remote stream in far eastern Russia, and later that the rock proved to be an extraterrestrial, a piece of a rare CV3 carbonaceous chondrite meteorite (known as Khatyrka) that formed 4.5 billion years ago in the pre-solar nebula. At present, the only known examples of natural quasicrystals are from the Khatyrka meteorite. Does that mean that quasicrystals must be extremely rare in the Universe? In this speculative essay, we present several reasons why the answer might be no. In fact, quasicrystals may prove to be among the most ubiquitous minerals found in the Universe.

Highly Divergent Genetic Variants of Soricid-Borne Altai Virus (Hantaviridae) in Eurasia Suggest Ancient Host-Switching Events

With the recent discovery of genetically distinct hantaviruses (family Hantaviridae) in shrews (order Eulipotyphla, family Soricidae), the once-conventional view that rodents (order Rodentia) served as the primordial reservoir hosts now appears improbable. The newly identified soricid-borne hantaviruses generally demonstrate well-resolved lineages organized according to host taxa and geographic origin. However, beginning in 2007, we detected sequences that did not conform to the prototypic hantaviruses associated with their soricid host species and/or geographic locations. That is, Eurasian common shrews (Sorex araneus), captured in Hungary and Russia, were found to harbor hantaviruses belonging to two separate and highly divergent lineages. We have since accumulated additional examples of these highly distinctive hantavirus sequences in the Laxmann’s shrew (Sorex caecutiens), flat-skulled shrew (Sorex roboratus) and Eurasian least shrew (Sorex minutissimus), captured at the same time and in the same location in the Sakha Republic in Far Eastern Russia. Pair-wise alignment and phylogenetic analysis of partial and full-length S-, M- and/or L-segment sequences indicate that a distinct hantavirus species related to Altai virus (ALTV), first reported in a Eurasian common shrew from Western Siberia, was being maintained in these closely related syntopic soricine shrew species. These findings suggest that genetic variants of ALTV might have resulted from ancient host-switching events with subsequent diversification within the Soricini tribe in Eurasia.