ligand promiscuity
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2020 ◽  
Vol 133 (9) ◽  
pp. jcs242404 ◽  
Author(s):  
Michael Bachmann ◽  
Markus Schäfer ◽  
Vasyl V. Mykuliak ◽  
Marta Ripamonti ◽  
Lia Heiser ◽  
...  


2019 ◽  
Vol 62 (10) ◽  
pp. 5132-5147 ◽  
Author(s):  
Sean W. Reilly ◽  
Aladdin A. Riad ◽  
Chia-Ju Hsieh ◽  
Kristoffer Sahlholm ◽  
Daniel A. Jacome ◽  
...  


2018 ◽  
Vol 116 (1) ◽  
pp. 245-254 ◽  
Author(s):  
Amelia R. McCready ◽  
Jon E. Paczkowski ◽  
Brad R. Henke ◽  
Bonnie L. Bassler

Quorum sensing is a cell–cell communication process that bacteria use to orchestrate group behaviors. Quorum sensing is mediated by signal molecules called autoinducers. Autoinducers are often structurally similar, raising questions concerning how bacteria distinguish among them. Here, we use thePseudomonas aeruginosaLasR quorum-sensing receptor to explore signal discrimination. The cognate autoinducer, 3OC12homoserine lactone (3OC12HSL), is a more potent activator of LasR than other homoserine lactones. However, other homoserine lactones can elicit LasR-dependent quorum-sensing responses, showing that LasR displays ligand promiscuity. We identify mutants that alter which homoserine lactones LasR detects. Substitution at residue S129 decreases the LasR response to 3OC12HSL, while enhancing discrimination against noncognate autoinducers. Conversely, the LasR L130F mutation increases the potency of 3OC12HSL and other homoserine lactones. We solve crystal structures of LasR ligand-binding domains complexed with noncognate autoinducers. Comparison with existing structures reveals that ligand selectivity/sensitivity is mediated by a flexible loop near the ligand-binding site. We show that LasR variants with modified ligand preferences exhibit altered quorum-sensing responses to autoinducers in vivo. We suggest that possessing some ligand promiscuity endows LasR with the ability to optimally regulate quorum-sensing traits.



2017 ◽  
Author(s):  
Michael Bachmann ◽  
Markus Schäfer ◽  
Vasyl V. Mykuliak ◽  
Marta Ripamonti ◽  
Lia Heiser ◽  
...  

AbstractαVβ3 integrin recognizes multiple extracellular matrix proteins, including vitronectin (Vn) and fibronectin (Fn). However, cell experiments are frequently performed on homogenously coated substrates with only one integrin ligand present. Here, we employed binary-choice substrates of Fn and Vn to dissect αVβ3 integrin-mediated binding to both ligands on the subcellular scale. Superresolution imaging revealed that αVβ3 integrin preferred binding to Vn under various conditions. In contrast, binding to Fn required mechanical load on αVβ3 integrin. Integrin mutations, structural analysis, and molecular dynamics simulations established a model where the extended-closed conformation of αVβ3 integrin binds Vn but not Fn. Force-mediated hybrid domain swing-out characterizes the extended-open conformation needed for efficient Fn binding. Thus, force-dependent conformational changes in αVβ3 integrin increase the number of available ligands and therefore the ligand promiscuity of this integrin. These findings for αVβ3 integrin were shown to regulate cell migration and mechanotransduction differentially on Fn compared to Vn and therefore to regulate cell behavior.



2017 ◽  
Vol 292 (12) ◽  
pp. 4847-4860 ◽  
Author(s):  
Virgínia M. R. Pires ◽  
Pedro M. M. Pereira ◽  
Joana L. A. Brás ◽  
Márcia Correia ◽  
Vânia Cardoso ◽  
...  




2015 ◽  
Vol 7 (1) ◽  
Author(s):  
Avid M Afzal ◽  
Hamse Y Mussa ◽  
Richard E Turner ◽  
Andreas Bender ◽  
Robert C Glen


2014 ◽  
Vol 10 (12) ◽  
pp. e1003995 ◽  
Author(s):  
Michael M. H. Graf ◽  
Lin Zhixiong ◽  
Urban Bren ◽  
Dietmar Haltrich ◽  
Wilfred F. van Gunsteren ◽  
...  


2013 ◽  
Vol 22 (7) ◽  
pp. 916-928 ◽  
Author(s):  
Adrianne L. Norris ◽  
Engin H. Serpersu
Keyword(s):  


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