molecular sequence analysis
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2020 ◽  
Vol 16 (1) ◽  
Author(s):  
Julia Rivero ◽  
Ángela María García-Sánchez ◽  
Antonio Zurita ◽  
Cristina Cutillas ◽  
Rocío Callejón

Abstract Background Recent studies have reported the existence of a Trichuris species complex parasitizing primate. Nevertheless, the genetic and evolutionary relationship between Trichuris spp. parasitizing humans and Non-Human Primates (NHP) is poorly understood. The hypothesised existence of different species of Trichuris in primates opens the possibility to evaluate these primates as reservoir hosts of human trichuriasis and other putative new species of whipworms. Results In this paper, we carried out a morphological, biometrical and molecular study of Trichuris population parasitizing Macaca sylvanus from Spain based on traditional morpho-biometrical methods, PCA analysis and ribosomal (ITS2) and mitochondrial (cox1 and cob) DNA sequencing. Morphological results revealed that Trichuris sp. from M. sylvanus is Trichuris trichiura. Ribosomal datasets revealed that phylogenetic relationships of populations of Trichuris sp. from M. sylvanus were unresolved. The phylogeny inferred on mitochondrial datasets (partitioned and concatenated) revealed similar topologies; Thus, phylogenetic trees supported the existence of clear molecular differentiation between individuals of Trichuris sp. from M. sylvanus appearing in two different subclades. Conclusions Based on morphological parameters, biometrical measurements, and molecular sequence analysis, we conclude that the whipworms isolated from M. sylvanus were T. trichiura. Further, the evolutionary relationship showed that these worms belonged to two genotypes within the T. trichiura lineage. Since T. trichiura is of public health importance, it is important to carry out further studies to improve the understanding of its hosts range, evolution and phylogeography.


2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Miran Kim ◽  
Myung Gil Park

Abstract Ciliate Mesodinium species are commonly distributed in diverse aquatic systems worldwide. Among Mesodinium species, M. rubrum is closely associated with microbial food webs and red tide formation and is known to acquire chloroplasts from its cryptophyte prey for use in photosynthesis. For these reasons, Mesodinium has long received much attention in terms of ecophysiology and chloroplast evolution. Mesodinium cells are easily identifiable from other organisms owing to their unique morphology comprising two hemispheres, but a clear distinction among species is difficult under a microscope. Recent taxonomic studies of Mesodinium have been conducted largely in parallel with molecular sequence analysis, and the results have shown that the best-known planktonic M. rubrum in fact comprises eight genetic clades of a M. rubrum/M. major complex. However, unlike the planktonic Mesodinium species, little is known of the genetic diversity of benthic Mesodinium species, and to our knowledge, the present study is the first to explore this. A total of ten genetic clades, including two clades composed of M. chamaeleon and M. coatsi, were found in marine sandy sediments, eight of which were clades newly discovered through this study. We report the updated phylogenetic relationship within the genus Mesodinium comprising heterotrophic/mixotrophic as well as planktonic/benthic species. Furthermore, we unveiled the wide variety of chloroplasts of benthic Mesodinium, which were related to the green cryptophyte Chroomonas/Hemiselmis and the red cryptophyte Rhodomonas/Storeatula/Teleaulax groups.


Biochimie ◽  
2013 ◽  
Vol 95 (7) ◽  
pp. 1476-1486 ◽  
Author(s):  
Dan E. Vivas-Ruiz ◽  
Gustavo A. Sandoval ◽  
Julio Mendoza ◽  
Rosalina R. Inga ◽  
Silea Gontijo ◽  
...  

2009 ◽  
Vol 50 (5) ◽  
pp. 2230 ◽  
Author(s):  
Rafael A. Oechsler ◽  
Michael R. Feilmeier ◽  
Dolena R. Ledee ◽  
Darlene Miller ◽  
Mara R. Diaz ◽  
...  

Plant Disease ◽  
2005 ◽  
Vol 89 (8) ◽  
pp. 867-871 ◽  
Author(s):  
S. Rooney-Latham ◽  
A. Eskalen ◽  
W. D. Gubler

Togninia minima is an important pathogen causing esca and grapevine declines worldwide. Although perithecia of T. minima have been produced in the laboratory, their presence in diseased vineyards has not been shown. In our study, perithecia of T. minima were found on grapevines in the field in five California counties. Perithecia were clustered on dead vascular tissue in deep cracks along trunks and cordons or on the surfaces of decayed pruning wounds. Field-collected perithecia were characteristic of T. minima perithecia previously produced in vitro and molecular sequence analysis of the internal transcribed spacer region of the nuclear ribosomal DNA additionally confirmed their identity. Ascospores from perithecia germinated on agar medium and formed colonies typical of T. minima. This is the first report of T. minima perithecia in diseased vineyards and suggests ascospores as an additional source of inoculum for new grapevine infections.


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