Synthesis and Antiviral Evaluation of AZT Analogues with a Spacer Arm Between Glucidic and Base Moieties. Part 2.

ChemInform ◽  
2007 ◽  
Vol 38 (46) ◽  
Author(s):  
Vincent Roy ◽  
Rachida Zerrouki ◽  
Pierre Krausz ◽  
Geraldine Laumond ◽  
Anne Marie Aubertin
Keyword(s):  
2007 ◽  
Vol 26 (5) ◽  
pp. 413-421 ◽  
Author(s):  
Vincent Roy ◽  
Rachida Zerrouki ◽  
Pierre Krausz ◽  
Géraldine Laumond ◽  
Anne Marie Aubertin
Keyword(s):  

eLife ◽  
2016 ◽  
Vol 5 ◽  
Author(s):  
Dan Tan ◽  
Qiang Li ◽  
Mei-Jun Zhang ◽  
Chao Liu ◽  
Chengying Ma ◽  
...  

To improve chemical cross-linking of proteins coupled with mass spectrometry (CXMS), we developed a lysine-targeted enrichable cross-linker containing a biotin tag for affinity purification, a chemical cleavage site to separate cross-linked peptides away from biotin after enrichment, and a spacer arm that can be labeled with stable isotopes for quantitation. By locating the flexible proteins on the surface of 70S ribosome, we show that this trifunctional cross-linker is effective at attaining structural information not easily attainable by crystallography and electron microscopy. From a crude Rrp46 immunoprecipitate, it helped identify two direct binding partners of Rrp46 and 15 protein-protein interactions (PPIs) among the co-immunoprecipitated exosome subunits. Applying it to E. coli and C. elegans lysates, we identified 3130 and 893 inter-linked lysine pairs, representing 677 and 121 PPIs. Using a quantitative CXMS workflow we demonstrate that it can reveal changes in the reactivity of lysine residues due to protein-nucleic acid interaction.


ChemInform ◽  
2001 ◽  
Vol 32 (39) ◽  
pp. no-no
Author(s):  
Africa Garcia-Barrientos ◽  
Juan J. Gracia-Lopez ◽  
Joaquin Isac-Garcia ◽  
Fernando Ortega-Caballero ◽  
Clara Uriel ◽  
...  
Keyword(s):  

2018 ◽  
Vol 16 ◽  
pp. 205873921880564
Author(s):  
Dong Wei ◽  
Guozhen Fang ◽  
Shuo Wang

In this study, we synthesized amino propyl ciprofloxacin (CPLX-NH2) as a ciprofloxacin (CPLX) derivative. Moreover, the immune antigen CPLX-NH2-BSA and coating antigen CPLX-NH2-OVA were prepared via CPLX-NH2 coupling with bovine serum albumin (BSA) and ovalbumin (OVA), respectively. Subsequently, the Kunming mice were immunized with immune antigen to obtain the polyclonal antibody with high titer. The regression equation of CPLX-NH2 antibody was y = –17.395x + 89.331 (R2 = 0.9961); IC50 and limit of detection (LOD) were 182.39 and 20.09 ng/mL, respectively. These results were superior to that of CPLX antibody. Meanwhile, the CPLX-NH2 antibody showed cross-reactivity to fluoroquinolones (FQNs) residues. The results of the study indicated that the proper modification of the drug, namely, the addition of a suitable spacer arm between the drug and the carrier protein will improve the efficacy of the antibody, which is a favorable concept for preparation of antibody.


2012 ◽  
Vol 12 (1) ◽  
pp. 35-42 ◽  
Author(s):  
Uripto Trisno Santoso ◽  
Radna Nurmasari ◽  
Dewi Umaningrum ◽  
Sri Juari Santosa ◽  
Bambang Rusdiarso ◽  
...  

Immobilization of humic acid (HA) onto chitosan using tosylation method with 1,4-butanediol as a spacer arm has been evaluated. Chitosan was phthaloylated selectively using phthalic anhydride in dimethylformamide as solvent with addition of 5% water (v/v) as cosolvent prior to be tosylated. N-phthaloyl-chitosan and HA were tosylated using tosyl chloride in excess and triethylamine as catalyst at temperature < 10 °C for 12 h. The 6-O-tosyl-N-phthaloyl-chitosan was reacted with 1,4-butanediol in order to obtain a spacer arm attached chitosan. The 6-O-butanol-N-phthaloyl-chitosan was activated by reacting with tosyl chloride. For evaluation on immobilization of HA on chitosan with and without spacer arm, 6-O-tosylbutane-N-phthaloyl-chitosan was reacted with HA and the 6-O-tosyl-N-phthaloyl-chitosan was reacted with HA. The HA immobilized onto chitosan was characterized by XRD and FTIR spectrophotometric method. The result showed that HA can be immobilized covalently onto chitosan after attaching 1,4-butanediol as spacer arm onto 6-O-tosyl-N-phthaloyl-chitosan and activating the product with tosyl chloride, but HA cannot be reacted directly onto 6-O-tosyl-N-phthaloyl-chitosan.


1987 ◽  
Author(s):  
J R Jefferson ◽  
J T Harmon ◽  
G A Jamieson

Attempts to photoaffinity label platelet ADP receptors with 2-azidoADP have not been successful possibly due to the absence of a spacer arm between the nucleotide and the photolabile group. We have synthesized a probe having a long spacer arm by coupling 2-(3-aminopropylthio)-ADP to succinimidyl 4-3H-azidobenzoate. Labeling competable by ADP could not demonstrated with intact platelets. With isolated platelet membranes, three bands (Mr 140,000, 110,000 and 46,000) were labeled that were not competed by ADP while three other bands (Mr 188,000, 92,000 and 51,000) were competable by 100 uM ADP.Another problem in characterizing ADP receptors has been complications due to ADP metabolism and secretion from the dense granules. To avoid this problem we have measured the binding of ADP and analogues to formalin-fixed platelets. ADP bound to two sites (Kl, 0.35 ± 0.04 uM; R1, 160,000 ± 20,000 sites/platelet; K2 7.9 ± 2.0 uM; R2, 400,000 ± 40,000 sites/platelet) with low non-specific binding: these values are in agreement with ADP concentrations required for activation. Affinity at the high affinity site was in the sequence ADP(0.35 uM)=ATP(0.4 uM)›2-MeS.ADP(6.8 uM)› GDP(49 uM) › AMP(360 uM); adenosine did not compete. Binding at the high affinity site was blocked by pMBS (EC50 250 uM) and 5-fluoro-sulfonylbenzoyladenosine (EC50 1 mM). This is the first report of photoaffinity labeling of putative ADP receptors. Our experiments with fixed platelets suggest that they may be useful in testing agonists, antagonists and inhibitors in the absence of complications due to secretion and metabolism.


2013 ◽  
Vol 172 (1) ◽  
pp. 382-389 ◽  
Author(s):  
Qingrui Huang ◽  
Dongxia Li ◽  
Aijun Kang ◽  
Wenqi An ◽  
Bei Fan ◽  
...  

2004 ◽  
Vol 76 (19) ◽  
pp. 5816-5822 ◽  
Author(s):  
Peter DePhillips ◽  
Inger Lagerlund ◽  
Johan Färenmark ◽  
Abraham M. Lenhoff

1993 ◽  
Vol 76 (2) ◽  
pp. 381-386 ◽  
Author(s):  
W Harvey Newsome ◽  
Jupiter M Yeung ◽  
Peter G Collins

Abstract A simple, sensitive, and precise enzyme-linked immunosorbent assay (ELISA) is described for the quantitation of captan as its degradation product tetrahydrophthalimide (THPI) in foods using polyclonal antibodies. Three hapten analogues of THPI with different alky I spacer arm lengths were synthesized. Immunogens and coating proteins were prepared by coupling these haptens to human serum albumin and ovalbumin, respectively. A 5-carbon spacer arm appeared to be optimum for the production of antibodies. Heterologous coating proteins did not improve the sensitivity, but reduction of homologous coating protein concentration did improve the sensitivity, resulting in a concentration of test compound required to inhibit binding by 50% of 15.5 ng/mL The antiserum is specific for captan, captafol, and THPI, but not other structurally related compounds. The minimum detection limit was 1 ng/mL; the linearity was 1-200 ng/mL. The overall recoveries of captan and THPI from 11 commodities spiked at 4 levels were 92 and 100%, respectively. The intra-assay and interassay coefficients of variation were 9.1 and 16.8% for apple blanks and 5.9 and 4.2% for apple spiked with 3 ppm THPI, respectively. The ELISA described is suitable for measuring captan and THPI at levels comparable to those typically found in fruit.


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