scholarly journals Mutational spectrum and prognosis in Chinese patients with prefibrotic primary myelofibrosis

eJHaem ◽  
2021 ◽  
Author(s):  
Chi‐Keung Cheng ◽  
Jennifer W. Y. Lai ◽  
Yuk‐Lin Yung ◽  
Hoi‐Yun Chan ◽  
Raymond S. M. Wong ◽  
...  
Author(s):  
Yi Zhang ◽  
Tao Wang ◽  
Yan Wang ◽  
Kun Xia ◽  
Jinchen Li ◽  
...  

AbstractNeurodevelopmental disorders (NDDs) are a group of diseases characterized by high heterogeneity and frequently co-occurring symptoms. The mutational spectrum in patients with NDDs is largely incomplete. Here, we sequenced 547 genes from 1102 patients with NDDs and validated 1271 potential functional variants, including 108 de novo variants (DNVs) in 78 autosomal genes and seven inherited hemizygous variants in six X chromosomal genes. Notably, 36 of these 78 genes are the first to be reported in Chinese patients with NDDs. By integrating our genetic data with public data, we prioritized 212 NDD candidate genes with FDR < 0.1, including 17 novel genes. The novel candidate genes interacted or were co-expressed with known candidate genes, forming a functional network involved in known pathways. We highlighted MSL2, which carried two de novo protein-truncating variants (p.L192Vfs*3 and p.S486Ifs*11) and was frequently connected with known candidate genes. This study provides the mutational spectrum of NDDs in China and prioritizes 212 NDD candidate genes for further functional validation and genetic counseling.


PLoS ONE ◽  
2011 ◽  
Vol 6 (12) ◽  
pp. e28986 ◽  
Author(s):  
Man-Ting So ◽  
Thomas Yuk-Yu Leon ◽  
Guo Cheng ◽  
Clara Sze-Man Tang ◽  
Xiao-Ping Miao ◽  
...  

2021 ◽  
Vol 11 ◽  
Author(s):  
Huili Zhang ◽  
Yaqin Li ◽  
Qiusheng Cheng ◽  
Xi Chen ◽  
Qiuxia Yu ◽  
...  

Objective: Dysferlin deficiency causes dysferlinopathy. This study aimed to expand the mutational spectrum of dysferlinopathies, to further study one case with diagnostic ambiguity, and to identify the diagnostic value of dysferlin expression in total peripheral blood mononuclear cells (PBMC).Methods: The clinical and molecular profiles of dysferlinopathies in eight Chinese patients were evaluated. We also conducted magnetic resonance imaging (6/8) and determined dysferlin protein expression in muscle (7/8) and PBMC (3/8).Results: Nine of the 13 DYSF mutations identified were novel. One patient was homozygous for the Gln111Ter mutation by genomic DNA sequencing but was found to be heterozygous by sequencing of cDNA from total PBMC. A daughter of this patient did not carry any Gln111Ter mutation. Abnormal muscle MRI with predominant involvement of the medial gastrocnemius and soleus muscle was observed in 5/6 patients. Dysferlin levels were significantly reduced (immunohistochemistry/immunoblot) or absent (immunohistochemistry) in muscle and total PBMC (26–39%) for most patients. Sarcoplasmic accumulation of dysferlin was detected in one patient.Conclusion: Genomic DNA sequencing detects frequent homozygous mutations, while fewer heterozygous mutations in cDNA are detected after posttranscription. Total PBMC may serve as an alternative to confirm diagnosis and to guide further testing in dysferlinopathies. Our results contribute to the mutational spectrum of dysferlinopathies.


2014 ◽  
Vol 15 (1) ◽  
Author(s):  
Ying Zhao ◽  
Xiaoying Zhang ◽  
Xinhua Bao ◽  
Qingping Zhang ◽  
Jingjing Zhang ◽  
...  

Author(s):  
Soji Morishita ◽  
Tomonori Ochiai ◽  
Kyohei Misawa ◽  
Satoshi Osaga ◽  
Tadaaki Inano ◽  
...  

2019 ◽  
Vol 182 (2) ◽  
pp. 279-288
Author(s):  
Kavitha Rethanavelu ◽  
Jasmine L. F. Fung ◽  
Jeffrey F. T. Chau ◽  
Steven L. C. Pei ◽  
Claudia C. Y. Chung ◽  
...  

Blood ◽  
2008 ◽  
Vol 112 (11) ◽  
pp. 5259-5259
Author(s):  
Sujiang Zhang ◽  
Jianyong Li ◽  
Jingyi Shi ◽  
Jun Xia

Abstract In recent three years the new notable progress associated with myeloproliferative disorder (MPD) was the identification of JAK2 and MPL mutations, which have been confirmed to be the major molecular mechanism and marker of BCR/ABL negative MPD. Multiple techniques including allele-specific PCR, conventional DNA sequencing, pyrosequencing as well as BsaXI restriction analysis have been used to detect these mutations. The previous data of Shanghai Group had demonstrated the sensitivity and preliminary result of JAK2 V617F in 162 Chinese patients with MPD using MassARRAY assay. To generally identify the frequency of these mutations in Chinese MPD patients, we continued to employ this technique-MassARRAY assay to detect JAK2 V617F, JAK2 K539L as well as MPL W515L mutation in a larger scale of Chinese MPD patients. A total of 204 Chinese MPD patients were enrolled in our study. These patients were referred to polycythemia vera (PV) (n=55), essential thrombocythemia (ET) (n=110), primary myelofibrosis (PMF) (n=29) and hypereosinophilic syndrome (HES) (n=10). 2 ml peripheral blood was obtained with informed consent and genomic DNA was isolated. The diagnosis of MPD was established according to the 2001 WHO diagnostic criteria. Finally, 187 patient samples with good signal can be analyzed for JAK2 V617F mutation. Among the available 101 signals of ET patients, 30 were heterozygous mutation and 9 were homozygous mutation. Among 52 PV patients, 25 were heterozygous mutation and 14 were homozygous mutation. Among 25 PMF patients, 9 were heterozygous mutation and 5 were homozygous mutation. None of HES patients was found harboring JAK2 V617F. In addition, we identified a PV patient harboring JAK2 K539L but not V617F mutation (1/52, 1.9%), and an ET patient harboring MPL W515L mutation (1/101, 1%). Both results were further confirmed by sequence analysis. Hence, we concluded that JAK2 V617F underlie the major molecular pathogenesis of Chinese MPD patients especially PV, however, JAK2 K539L and MPL W515L are rare events in these patients.


2021 ◽  
Author(s):  
Yi Zhang ◽  
Tao Wang ◽  
Yan Wang ◽  
Kun Xia ◽  
Jinchen Li ◽  
...  

Abstract Neurodevelopmental disorders (NDDs) are a group of diseases characterized by highly heterogeneity and frequently co-occur symptoms. The mutational spectrum in patients with NDDs is largely incomplete. Here, we sequenced 547 genes from 1,102 patients with NDDs and validated 1,271 potential functional variants, including 108 de novo variants (DNVs) in 78 autosomal genes and seven inherited hemizygous variants in six X chromosomal genes. Notably, 36 of these 78 genes are the first to be reported in Chinese patients with NDDs. By integrating our genetic data with public data, we prioritised 212 NDD candidate genes with FDR < 0.1, including 17 novel genes. The novel candidate genes interacted or were co-expressed with known candidate genes, forming a functional network involved in known pathways. We highlighted MSL2, which carried two de novo protein-truncating variants (p.L192Vfs*3 and p.S486Ifs*11) and was most frequently connected with known candidate genes. This study provides the mutational spectrum of NDDs in China and prioritises 212 NDD candidate genes for further functional validation and genetic counseling.


2015 ◽  
Vol 354 (1-2) ◽  
pp. 21-26 ◽  
Author(s):  
Juan Zhao ◽  
Zhaoxia Wang ◽  
Daojun Hong ◽  
He Lv ◽  
Wei Zhang ◽  
...  

2014 ◽  
Vol 45 (3) ◽  
pp. 498-503 ◽  
Author(s):  
Xubo Gong ◽  
Xingguo Lu ◽  
Xibin Xiao ◽  
Weiqin Wang ◽  
Jin Yang ◽  
...  

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