scholarly journals Hugonella massiliensis gen. nov., sp. nov., genome sequence, and description of a new strictly anaerobic bacterium isolated from the human gut

2017 ◽  
Vol 6 (4) ◽  
pp. e00458 ◽  
Author(s):  
Ziena Elsawi ◽  
Amadou Hamidou Togo ◽  
Mamadou Beye ◽  
Grégory Dubourg ◽  
Claudia Andrieu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Strictly Anaerobic ◽  
Human Gut

scholarly journals Genome Sequence of the Poly-3-Hydroxybutyrate Producer Clostridium acetireducens DSM 10703

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Sebastian Flüchter ◽  
Anja Poehlein ◽  
Bettina Schiel-Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Strictly Anaerobic ◽  
Circular Chromosome ◽  
Protein Encoding ◽  
Encoding Genes

Here, we report the genome sequence of Clostridium acetireducens (DSM 10703 T ), a strictly anaerobic bacterium capable of fermenting acetate and leucine to butyrate, isovalerate, and poly-3-hydroxybutyrate. The draft genome consists of a circular chromosome with a size of 2.4 Mb and harbors 2,239 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence ofOlsenella scatoligenesSK9K4T, a Producer of 3-Methylindole (Skatole) and 4-Methylphenol (p-Cresol), Isolated from Pig Feces

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Xiaoqiong Li ◽  
Ole Højberg ◽  
Samantha Joan Noel ◽  
Nuria Canibe ◽  
Bent Borg Jensen
Keyword(s):  
Amino Acids ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic

Olsenella scatoligenesSK9K4Tis a strictly anaerobic bacterium isolated from pig feces that produces the malodorous compounds 3-methylindole (skatole) and 4-methylphenol (p-cresol). Here, we report the 2.47 Mbp draft genome sequence of SK9K4T, exploring pathways for the synthesis of skatole andp-cresol from the amino acids tryptophan and tyrosine, respectively.

scholarly journals Draft Genome Sequence of Caloramator mitchellensis , a Thermoanaerobe Isolated from the Waters of the Great Artesian Basin

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Bharat K. C. Patel ◽  
Valentino Setoa Junior Te'o
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Phenotypic Traits ◽  
Strictly Anaerobic ◽  
Artesian Basin ◽  
Great Artesian Basin ◽  
Flowing Waters ◽  
Bore Well

The genome sequence of Caloramator mitchellensis strain VF08, a rod-shaped, heterotrophic, strictly anaerobic bacterium isolated from the free-flowing waters of a Great Artesian Basin (GAB) bore well located in Mitchell, an outback Queensland town in Australia, is reported here. The analysis of the 2.42-Mb genome sequence indicates that the attributes of the genome are consistent with its physiological and phenotypic traits.

scholarly journals Draft Genome Sequence of the Strict Anaerobe Clostridium neopropionicum X4 (DSM 3847 T )

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Matthias H. Beck ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Bettina Schiel-Bengelsdorf ◽  
Rolf Daniel ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Single Chromosome ◽  
Strict Anaerobe

Here, we report the draft genome sequence of Clostridium neopropionicum X4 (DSM 3847 T ), a strictly anaerobic bacterium capable of fermenting ethanol and CO 2 to propionate, acetate, and propanol. The genome consists of a single chromosome (3.19 Mb).

scholarly journals Genome sequence and description of Bacteroides bouchesdurhonensis sp. nov., a new anaerobic bacterium isolated from the human gut

2019 ◽  
Vol 31 ◽  
pp. 100571 ◽  
Author(s):  
S. Ndongo ◽  
M.L. Tall ◽  
I.I. Ngom ◽  
P.-E. Fournier ◽  
A. Levasseur ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Human Gut

scholarly journals Draft Genome Sequence of Desulfobacter hydrogenophilus DSM 3380, a Psychrotolerant Sulfate-Reducing Bacterium

2020 ◽  
Vol 9 (14) ◽  
Author(s):  
Emma Bertran ◽  
Lewis M. Ward ◽  
David T. Johnston
Keyword(s):  
Sulfate Reduction ◽  
Genome Sequence ◽  
Environmental Conditions ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Strictly Anaerobic ◽  
Content Type ◽  
Sulfate Reducing ◽  
Microbial Sulfate Reduction ◽  
Wide Range

Here, we describe the genome of Desulfobacter hydrogenophilus DSM 3380, a bacterium that belongs to the Desulfobacterales. The genome of this strictly anaerobic bacterium capable of sulfate reduction expands our understanding of microbial sulfate reduction in a wide range of environmental conditions.

scholarly journals Draft Genome Sequence of the Strict AnaerobeClostridium homopropionicumLuHBu1 (DSM 5847)

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Matthias H. Beck ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Bettina Schiel-Bengelsdorf ◽  
Rolf Daniel ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Single Chromosome ◽  
Propionate Fermentation

Here, we report the draft genome sequence ofClostridium homopropionicumLuHBu1 (DSM 5847T), a strictly anaerobic bacterium, which performs propionate fermentation and is capable of growing with 2-, 3-, or 4-hydroxybutyrate as its sole substrate. The genome consists of a single chromosome of 3.65 Mb.

scholarly journals Conversion of Daidzein and Genistein by an Anaerobic Bacterium Newly Isolated from the Mouse Intestine

2008 ◽  
Vol 74 (15) ◽  
pp. 4847-4852 ◽  
Author(s):  
Anastasia Matthies ◽  
Thomas Clavel ◽  
Michael Gütschow ◽  
Wolfram Engst ◽  
Dirk Haller ◽  
...  
Keyword(s):  
Stationary Phase ◽  
Enzyme Induction ◽  
Growth Phase ◽  
Anaerobic Bacterium ◽  
Stationary Growth Phase ◽  
Gut Bacteria ◽  
Soy Isoflavones ◽  
Strictly Anaerobic ◽  
Stationary Growth ◽  
Mouse Intestine

ABSTRACT The metabolism of isoflavones by gut bacteria plays a key role in the availability and bioactivation of these compounds in the intestine. Daidzein and genistein are the most common dietary soy isoflavones. While daidzein conversion yielding equol has been known for some time, the corresponding formation of 5-hydroxy-equol from genistein has not been reported previously. We isolated a strictly anaerobic bacterium (Mt1B8) from the mouse intestine which converted daidzein via dihydrodaidzein to equol as well as genistein via dihydrogenistein to 5-hydroxy-equol. Strain Mt1B8 was a gram-positive, rod-shaped bacterium identified as a member of the Coriobacteriaceae. Strain Mt1B8 also transformed dihydrodaidzein and dihydrogenistein to equol and 5-hydroxy-equol, respectively. The conversion of daidzein, genistein, dihydrodaidzein, and dihydrogenistein in the stationary growth phase depended on preincubation with the corresponding isoflavonoid, indicating enzyme induction. Moreover, dihydrogenistein was transformed even more rapidly in the stationary phase when strain Mt1B8 was grown on either genistein or daidzein. Growing the cells on daidzein also enabled conversion of genistein. This suggests that the same enzymes are involved in the conversion of the two isoflavones.

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