scholarly journals A ranking of diffusion MRI compartment models with in vivo human brain data

2013 ◽  
Vol 72 (6) ◽  
pp. 1785-1792 ◽  
Author(s):  
Uran Ferizi ◽  
Torben Schneider ◽  
Eleftheria Panagiotaki ◽  
Gemma Nedjati-Gilani ◽  
Hui Zhang ◽  
...  
Author(s):  
Uran Ferizi ◽  
Torben Schneider ◽  
Eleftheria Panagiotaki ◽  
Gemma Nedjati-Gilani ◽  
Hui Zhang ◽  
...  
Keyword(s):  

Author(s):  
Uran Ferizi ◽  
Torben Schneider ◽  
Maira Tariq ◽  
Claudia A. M. Wheeler-Kingshott ◽  
Hui Zhang ◽  
...  
Keyword(s):  

2017 ◽  
Vol 30 (9) ◽  
pp. e3734 ◽  
Author(s):  
Uran Ferizi ◽  
Benoit Scherrer ◽  
Torben Schneider ◽  
Mohammad Alipoor ◽  
Odin Eufracio ◽  
...  

2020 ◽  
Vol 6 (31) ◽  
pp. eaba8245 ◽  
Author(s):  
Simona Schiavi ◽  
Mario Ocampo-Pineda ◽  
Muhamed Barakovic ◽  
Laurent Petit ◽  
Maxime Descoteaux ◽  
...  

Diffusion magnetic resonance imaging is a noninvasive imaging modality that has been extensively used in the literature to study the neuronal architecture of the brain in a wide range of neurological conditions using tractography. However, recent studies highlighted that the anatomical accuracy of the reconstructions is inherently limited and challenged its appropriateness. Several solutions have been proposed to tackle this issue, but none of them proved effective to overcome this fundamental limitation. In this work, we present a novel processing framework to inject into the reconstruction problem basic prior knowledge about brain anatomy and its organization and evaluate its effectiveness using both simulated and real human brain data. Our results indicate that our proposed method dramatically increases the accuracy of the estimated brain networks and, thus, represents a major step forward for the study of connectivity.


2019 ◽  
Vol 225 (4) ◽  
pp. 1277-1291 ◽  
Author(s):  
Susie Y. Huang ◽  
Qiyuan Tian ◽  
Qiuyun Fan ◽  
Thomas Witzel ◽  
Barbara Wichtmann ◽  
...  

2021 ◽  
Author(s):  
Matteo Frigo ◽  
Rutger H.J. Fick ◽  
Mauro Zucchelli ◽  
Samuel Deslauriers-Gauthier ◽  
Rachid Deriche

AbstractState-of-the-art multi-compartment microstructural models of diffusion MRI (dMRI) in the human brain have limited capability to model multiple tissues at the same time. In particular, the available techniques that allow this multi-tissue modelling are based on multi-TE acquisitions. In this work we propose a novel multi-tissue formulation of classical multi-compartment models that relies on more common single-TE acquisitions and can be employed in the analysis of previously acquired datasets. We show how modelling multiple tissues provides a new interpretation of the concepts of signal fraction and volume fraction in the context of multi-compartment modelling. The software that allows to inspect single-TE diffusion MRI data with multi-tissue multi-compartment models is included in the publicly available Dmipy Python package.


NeuroImage ◽  
2015 ◽  
Vol 118 ◽  
pp. 468-483 ◽  
Author(s):  
Uran Ferizi ◽  
Torben Schneider ◽  
Thomas Witzel ◽  
Lawrence L. Wald ◽  
Hui Zhang ◽  
...  

1994 ◽  
Vol 31 (2) ◽  
pp. 185
Author(s):  
Yong Whee Bahk ◽  
Kyung Sub Shinn ◽  
Tae Suk Suh ◽  
Bo Young Choe ◽  
Kyo Ho Choi

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