Learning Variables Structure Using Evolutionary Algorithms to Improve Predictive Performance

2020 ◽  
pp. 58-68
Author(s):  
Damián Nimo ◽  
Bernabé Dorronsoro ◽  
Ignacio J. Turias ◽  
Daniel Urda
Keyword(s):  
Evolutionary Algorithms ◽  
Predictive Performance

Opponent Center-Surround Contrast: Colour to Grey Conversion

2020 ◽  
Vol 2020 (1) ◽  
pp. 105-108
Author(s):  
Ali Alsam
Keyword(s):  
Evolutionary Algorithms ◽  
Three Dimensional ◽  
The State ◽  
Colour Space ◽  
Vision Science ◽  
State Of Art ◽  
Over Time

Vision is the science that informs us about the biological and evolutionary algorithms that our eyes, opticnerves and brains have chosen over time to see. This article is an attempt to solve the problem of colour to grey conversion, by borrowing ideas from vision science. We introduce an algorithm that measures contrast along the opponent colour directions and use the results to combine a three dimensional colour space into a grey. The results indicate that the proposed algorithm competes with the state of art algorithms.

PVT-Biomass-Battery systems optimized with evolutionary algorithms for small and highly shaded environments

2016 ◽  
pp. 568-573
Author(s):  
J.A. Fernández Fernández ◽  
P. González-Rodelas ◽  
E. Alameda-Hernández
Keyword(s):  
Evolutionary Algorithms ◽  
Battery Systems

Applied Process Simulation-Driven Oil and Gas Separation Plant Optimization using Surrogate Modeling and Evolutionary Algorithms

2019 ◽  
Author(s):  
Anders Andreasen
Keyword(s):  
Evolutionary Algorithms ◽  
Gas Separation ◽  
Oil And Gas ◽  
Optimal Solution ◽  
Computer Experiment ◽  
Latin Hypercube Sampling ◽  
Surrogate Models ◽  
Inlet Temperature ◽  
Separation Plant ◽  
Separation Stage

In this article the optimization of a realistic oil and gas separation plant has been studied. Two different fluids are investigated and compared in terms of the optimization potential. Using Design of Computer Experiment (DACE) via Latin Hypercube Sampling (LHS) and rigorous process simulations, surrogate models using Kriging have been established for selected model responses. The surrogate models are used in combination with a variety of different evolutionary algorithms for optimizing the operating profit, mainly by maximizing the recoverable oil production. A total of 10 variables representing pressure and temperature various key places in the separation plant are optimized to maximize the operational profit. The optimization is bounded in the variables and a constraint function is included to ensure that the optimal solution allows export of oil with an RVP < 12 psia. The main finding is that, while a high pressure is preferred in the first separation stage, apparently a single optimal setting for the pressure in downstream separators does not appear to exist. In the second stage separator apparently two different, yet equally optimal, settings are revealed. In the third and final separation stage a correlation between the separator pressure and the applied inlet temperature exists, where different combinations of pressure and temperature yields equally optimal results.<br>

Predictive performance modeling of Habesha brewery wastewater treatment plant using artificial neural networks

2019 ◽  
Author(s):  
Chem Int
Keyword(s):  
Neural Networks ◽  
Water Quality ◽  
Wastewater Treatment ◽  
Artificial Neural Networks ◽  
Performance Modeling ◽  
Predictive Performance ◽  
Mathematical Tool ◽  
Effluent Water ◽  
Artificial Neural

Recently, process control in wastewater treatment plants (WWTPs) is, mostly accomplished through examining the quality of the water effluent and adjusting the processes through the operator’s experience. This practice is inefficient, costly and slow in control response. A better control of WTPs can be achieved by developing a robust mathematical tool for performance prediction. Due to their high accuracy and quite promising application in the field of engineering, Artificial Neural Networks (ANNs) are attracting attention in the domain of WWTP predictive performance modeling. This work focuses on applying ANN with a feed-forward, back propagation learning paradigm to predict the effluent water quality of the Habesha brewery WTP. Data of influent and effluent water quality covering approximately an 11-month period (May 2016 to March 2017) were used to develop, calibrate and validate the models. The study proves that ANN can predict the effluent water quality parameters with a correlation coefficient (R) between the observed and predicted output values reaching up to 0.969. Model architecture of 3-21-3 for pH and TN, and 1-76-1 for COD were selected as optimum topologies for predicting the Habesha Brewery WTP performance. The linear correlation between predicted and target outputs for the optimal model architectures described above were 0.9201 and 0.9692, respectively.

Convergence Analysis and Comparison of Evolutionary Algorithms Based on Relation Model

2011 ◽  
Vol 34 (5) ◽  
pp. 801-811 ◽  
Author(s):  
Han HUANG ◽  
Zhi-Yong LIN ◽  
Zhi-Feng HAO ◽  
Yu-Shan ZHANG ◽  
Xue-Qiang LI
Keyword(s):  
Evolutionary Algorithms ◽  
Convergence Analysis ◽  
Relation Model

Machine Learning-Based Scoring Functions. Development and Applications with SAnDReS.

2020 ◽  
Vol 27 ◽  
Author(s):  
Gabriela Bitencourt-Ferreira ◽  
Camila Rizzotto ◽  
Walter Filgueira de Azevedo Junior
Keyword(s):  
Machine Learning ◽  
Binding Affinity ◽  
Drug Targets ◽  
Computational Models ◽  
Factor Xa ◽  
Coagulation Factor ◽  
Predictive Performance ◽  
Machine Learning Techniques ◽  
Scoring Functions ◽  
Molegro Virtual Docker

Background: Analysis of atomic coordinates of protein-ligand complexes can provide three-dimensional data to generate computational models to evaluate binding affinity and thermodynamic state functions. Application of machine learning techniques can create models to assess protein-ligand potential energy and binding affinity. These methods show superior predictive performance when compared with classical scoring functions available in docking programs. Objective: Our purpose here is to review the development and application of the program SAnDReS. We describe the creation of machine learning models to assess the binding affinity of protein-ligand complexes. Method: SAnDReS implements machine learning methods available in the scikit-learn library. This program is available for download at https://github.com/azevedolab/sandres. SAnDReS uses crystallographic structures, binding, and thermodynamic data to create targeted scoring functions. Results: Recent applications of the program SAnDReS to drug targets such as Coagulation factor Xa, cyclin-dependent kinases, and HIV-1 protease were able to create targeted scoring functions to predict inhibition of these proteins. These targeted models outperform classical scoring functions. Conclusion: Here, we reviewed the development of machine learning scoring functions to predict binding affinity through the application of the program SAnDReS. Our studies show the superior predictive performance of the SAnDReS-developed models when compared with classical scoring functions available in the programs such as AutoDock4, Molegro Virtual Docker, and AutoDock Vina.

Application of Machine Learning Techniques to Predict Binding Affinity for Drug Targets: A Study of Cyclin-Dependent Kinase 2

2020 ◽  
Vol 28 (2) ◽  
pp. 253-265 ◽  
Author(s):  
Gabriela Bitencourt-Ferreira ◽  
Amauri Duarte da Silva ◽  
Walter Filgueira de Azevedo
Keyword(s):  
Machine Learning ◽  
Binding Affinity ◽  
Predictive Performance ◽  
Supervised Machine Learning ◽  
Machine Learning Techniques ◽  
Scoring Functions ◽  
Cyclin Dependent Kinase ◽  
Learning Models ◽  
Learning Techniques ◽  
Machine Learning Models

Background: The elucidation of the structure of cyclin-dependent kinase 2 (CDK2) made it possible to develop targeted scoring functions for virtual screening aimed to identify new inhibitors for this enzyme. CDK2 is a protein target for the development of drugs intended to modulate cellcycle progression and control. Such drugs have potential anticancer activities. Objective: Our goal here is to review recent applications of machine learning methods to predict ligand- binding affinity for protein targets. To assess the predictive performance of classical scoring functions and targeted scoring functions, we focused our analysis on CDK2 structures. Methods: We have experimental structural data for hundreds of binary complexes of CDK2 with different ligands, many of them with inhibition constant information. We investigate here computational methods to calculate the binding affinity of CDK2 through classical scoring functions and machine- learning models. Results: Analysis of the predictive performance of classical scoring functions available in docking programs such as Molegro Virtual Docker, AutoDock4, and Autodock Vina indicated that these methods failed to predict binding affinity with significant correlation with experimental data. Targeted scoring functions developed through supervised machine learning techniques showed a significant correlation with experimental data. Conclusion: Here, we described the application of supervised machine learning techniques to generate a scoring function to predict binding affinity. Machine learning models showed superior predictive performance when compared with classical scoring functions. Analysis of the computational models obtained through machine learning could capture essential structural features responsible for binding affinity against CDK2.

Evolutionary Algorithms for Optimizing Cost and QoS on Cloud-based Content Distribution Networks

2019 ◽  
Vol 45 (8) ◽  
pp. 544-556 ◽  
Author(s):  
S. Iturriaga ◽  
S. Nesmachnow ◽  
G. Goñi ◽  
B. Dorronsoro ◽  
A. Tchernykh
Keyword(s):  
Evolutionary Algorithms ◽  
Content Distribution ◽  
Distribution Networks ◽  
Content Distribution Networks
Sign in / Sign up

Export Citation Format

Share Document