Predicting Protein-Protein Interactions from Amino Acid Sequences Using SaE-ELM Combined with Continuous Wavelet Descriptor and PseAA Composition

2015 ◽  
pp. 634-645 ◽  
Author(s):  
Yu-An Huang ◽  
Zhu-Hong You ◽  
Jianqiang Li ◽  
Leon Wong ◽  
Shubin Cai
Keyword(s):  
Amino Acid ◽  
Protein Interactions ◽  
Amino Acid Sequences ◽  
Continuous Wavelet ◽  
Protein Protein Interactions ◽  
Wavelet Descriptor

scholarly journals A novel matrix of sequence descriptors for predicting protein-protein interactions from amino acid sequences

PLoS ONE ◽  
2019 ◽  
Vol 14 (6) ◽  
pp. e0217312 ◽  
Author(s):  
Xue Wang ◽  
Yuejin Wu ◽  
Rujing Wang ◽  
Yuanyuan Wei ◽  
Yuanmiao Gui
Keyword(s):  
Amino Acid ◽  
Protein Interactions ◽  
Amino Acid Sequences ◽  
Protein Protein Interactions

scholarly journals Prediction of protein-protein interactions from amino acid sequences using a novel multi-scale continuous and discontinuous feature set

2014 ◽  
Vol 15 (Suppl 15) ◽  
pp. S9 ◽  
Author(s):  
Zhu-Hong You ◽  
Lin Zhu ◽  
Chun-Hou Zheng ◽  
Hong-Jie Yu ◽  
Su-Ping Deng ◽  
...  
Keyword(s):  
Amino Acid ◽  
Protein Interactions ◽  
Amino Acid Sequences ◽  
Protein Protein Interactions ◽  
Multi Scale

Engineering an acetyllysine reader with photocrosslinking amino acid for interactome profiling

2021 ◽  
Author(s):  
Babu Sudhamalla ◽  
Anirban Roy ◽  
Soumen Barman ◽  
Jyotirmayee Padhan
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Protein Interactions ◽  
Unnatural Amino Acids ◽  
Protein Protein Interactions ◽  
Site Specific ◽  
Powerful Approach

The site-specific installation of light-activable crosslinker unnatural amino acids offers a powerful approach to trap transient protein-protein interactions both in vitro and in vivo. Herein, we engineer a bromodomain to...

scholarly journals Engineering bromodomains with a photoactive amino acid by engaging ‘Privileged’ tRNA synthetases

2020 ◽  
Vol 56 (25) ◽  
pp. 3641-3644
Author(s):  
Shana Wagner ◽  
Babu Sudhamalla ◽  
Philip Mannes ◽  
Sushma Sappa ◽  
Sam Kavoosi ◽  
...  
Keyword(s):  
Amino Acid ◽  
Chemical Synthesis ◽  
Protein Interactions ◽  
Protein Protein Interactions ◽  
Site Specific ◽  
Trna Synthetases

An improved chemical synthesis, site-specific incorporation and enhanced photo-crosslinking ability of tmdF have been demonstrated in the context of protein–protein interactions.

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