Covalent and Ionic Binding – Electron Sharing

Author(s):  
Bogdan Povh ◽  
Mitja Rosina
Keyword(s):  
2014 ◽  
Vol 13 ◽  
pp. 92-100 ◽  
Author(s):  
Diky Mudhakir ◽  
Caroline Wibisono ◽  
Heni Rachmawati

Cells ◽  
2022 ◽  
Vol 11 (2) ◽  
pp. 290
Author(s):  
Zachary Graber ◽  
Desmond Owusu Kwarteng ◽  
Shannon M. Lange ◽  
Yannis Koukanas ◽  
Hady Khalifa ◽  
...  

Diacylglycerol pyrophosphate (DGPP) is an anionic phospholipid formed in plants, yeast, and parasites under multiple stress stimuli. It is synthesized by the phosphorylation action of phosphatidic acid (PA) kinase on phosphatidic acid, a signaling lipid with multifunctional properties. PA functions in the membrane through the interaction of its negatively charged phosphomonoester headgroup with positively charged proteins and ions. DGPP, like PA, can interact electrostatically via the electrostatic-hydrogen bond switch mechanism but differs from PA in its overall charge and shape. The formation of DGPP from PA alters the physicochemical properties as well as the structural dynamics of the membrane. This potentially impacts the molecular and ionic binding of cationic proteins and ions with the DGPP enriched membrane. However, the results of these important interactions in the stress response and in DGPP’s overall intracellular function is unknown. Here, using 31P MAS NMR, we analyze the effect of the interaction of low DGPP concentrations in model membranes with the peptides KALP23 and WALP23, which are flanked by positively charged Lysine and neutral Tryptophan residues, respectively. Our results show a significant effect of KALP23 on the charge of DGPP as compared to WALP23. There was, however, no significant effect on the charge of the phosphomonoester of DGPP due to the interaction with positively charged lipids, dioleoyl trimethylammonium propane (DOTAP) and dioleoyl ethyl-phosphatidylcholine (EtPC). Divalent calcium and magnesium cations induce deprotonation of the DGPP headgroup but showed no noticeable differences on DGPP’s charge. Our results lead to a novel model for DGPP—protein interaction.


1970 ◽  
Vol 18 (10) ◽  
pp. 746-755 ◽  
Author(s):  
JOHN C. MAISEL

In order to distinguish whether fluorescent-protein staining of nucleoli in acetone-fixed cell culture monolayers is a useless artifact or whether nucleolus-globulin affinity reflects a physiologic interaction between cells and serum, the phenomenon was investigated by further characterizing the interacting components and the conditions required. Staining proved to be a time-dependent and temperature-dependent, two-step procedure: initial modification of nucleoli by smaller serum γ-globulins is required for later ionic binding to nucleoli of fluorescein-labeled, nonimmune α-, β- or larger α-globulins. The initial modification is essential only in cells grown in minimal serum and harvested toward the end of the logarithmic growth phase of the culture. The nucleolar component binding the conjugate is both heat- and pH-stable, is maintained in situ apparently by ionic bonds and most likely includes a saline-insoluble, nonhistone basic protein. Previous serum modification of nucleoli in living primarily explanted monkey kidney cells, detected with this technique, could not be demonstrated with established H-Ep 2 or HeLa cell lines of human tumor origin. These data suggest that serum-dependent nucleolar fluorescent protein staining might be a useful artifact, signifying something about nucleolar organization or content of unexplained relation to cell growth.


1974 ◽  
Vol 22 (9) ◽  
pp. 895-907 ◽  
Author(s):  
R. M. BRISSIE ◽  
S. S. SPICER ◽  
B. J. HALL ◽  
N. T. THOMPSON

Verhoeff's iron hematoxylin (VIH) applied to epoxy thin sections provides ultrastructural staining of selected sites including elastic fibers, ribosomes, heterochromatin in nuclei of somatic cells, chromatin clumps in germ cells and the nucleolonema and ovoid body of the nucleolus of primary spermatocytes. Granules in rat parotid acinar cells show several staining patterns not otherwise easily recognized. Mucous droplets or granules of goblet or Paneth cells of the ileum stain. Staining of defined polymers in epoxy thin sections indicates that VIH reacts with polycations and polyanions. Ethanolic hematoxylin alone at pH 1.3 imparts electron opacity to heterochromatin, ribosomes, parotid granules and elastica but yields no staining for light microscopy. A hematoxylin-FeCl3, solution stains mucus of goblet and Paneth cells. The latter staining, which requires FeCl3 in the solution, can be eliminated by saturating the solution with NaCl and, accordingly, depends on ionic binding. Staining of elastic fibers and parotid acinar granules depends on hydrogen bonding, since saturation of the VIH or hematoxylin solution with urea blocks the ultrastructural staining. Urea does not, however, alter the staining of nuclear structures or ribosomes.


1975 ◽  
Vol 63 (4) ◽  
pp. 1621-1633 ◽  
Author(s):  
L. A. Curtiss ◽  
C. W. Kern ◽  
R. L. Matcha

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