Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophyll content in wheat

2004 ◽  
Vol 4 (2) ◽  
pp. 118-130 ◽  
Author(s):  
Meredith Carter ◽  
Karon Ryan ◽  
Adam Hunter ◽  
Matthew Bellgard ◽  
Rudi Appels ◽  
...  
Keyword(s):  
2009 ◽  
Vol 43 (2) ◽  
pp. 99-111
Author(s):  
S. Chebotar ◽  
P. Sourdille ◽  
E. Paux ◽  
F. Balfourier ◽  
C. Feuillet ◽  
...  

Genome ◽  
2006 ◽  
Vol 49 (7) ◽  
pp. 729-734 ◽  
Author(s):  
R C Leach ◽  
I S Dundas ◽  
A Houben

The physical length of the rye segment of a 4BS.4BL–5RL translocation derived from the Cornell Wheat Selection 82a1-2-4-7 in a Triticum aestivum 'Chinese Spring' background was measured using genomic in situ hybridization (GISH) and found to be 16% of the long arm. The size of this translocation was similar to previously published GISH measurements of another 4BS.4BL–5RL translocation in a Triticum aestivum 'Viking' wheat background. Molecular maps of both 4BS.4BL–5RL translocations for 2 different wheat backgrounds were developed using RFLP analysis. The locations of the translocation breakpoints of the 2 4BS.4BL–5RL translocations were similar even though they arose in different populations. This suggests a unique property of the region at or near the translocation breakpoint that could be associated with their similarity and spontaneous formation. These segments of rye chromosome 5 also contain a gene for copper efficiency that improves the wheat's ability to cope with low-copper soils. Genetic markers in these maps can also be used to screen for copper efficiency in bread wheat lines derived from the Cornell Wheat Selection 82a1 2-4-7.Key words: Triticum aestivum, wheat–rye translocation, homoeologous group 4, homoeologous group 5, GISH, comparative map, copper efficiency, hairy peduncle.


Genome ◽  
2005 ◽  
Vol 48 (4) ◽  
pp. 747-754 ◽  
Author(s):  
Eiko Himi ◽  
Ahmed Nisar ◽  
Kazuhiko Noda

Pigmentation of wheat grain and coleoptile is controlled by the R gene on chromosomes of the homoeologous group 3 and the Rc gene on chromosomes of the homoeologous group 7, respectively. Each of these genes is inherited monogenically. The pigment of grain has been suggested to be a derivative of catechin-tannin and that of coleoptile to be anthocyanin. These polyphenol compounds are known to be synthesized through the flavonoid biosynthesis pathway. We isolated 4 partial nucleotide sequences of the early flavonoid biosynthesis genes (CHS, CHI, F3H, and DFR) in wheat. The expression of these genes was examined in the developing grain of red-grained and white-grained wheat lines. CHS, CHI, F3H, and DFR were highly upregulated in the grain coat tissue of the red-grained lines, whereas there was no significant expression in the white-grained lines. These results indicate that the R gene is involved in the activation of the early flavonoid biosynthesis genes. As for coleoptile pigmentation, all 4 genes were expressed in the red coleoptile; however, DFR was not activated in the white coleoptile. The Rc gene appears to be involved in DFR expression. The possibility that wheat R and Rc genes might be transcription factors is discussed.Key words: flavonoid biosynthesis genes, R gene for grain color, Rc gene for coleoptile color, wheat.


2008 ◽  
Vol 44 (No. 1) ◽  
pp. 22-29 ◽  
Author(s):  
K. Pánková ◽  
Z. Milec ◽  
M. Leverington-Waite ◽  
S. Chebotar ◽  
J.W. Snape

Several sets of wheat inter-varietal chromosome substitution lines (SLs) have been produced over the last fifty years at the CRI (formerly RICP) in Prague-Ruzyně, based on cytogenetic manipulations using aneuploids. Lines with defined genes have been obtained which significantly influence growth habit and flowering time and these have been used particularly in the study of the genetics and physiology of flowering. The sets of lines include substitutions of homoeologous group 5 chromosomes carrying Vrn genes that control vernalisation response, homoeologous group 2 chromosomes with Ppd genes controlling photoperiodic sensitivity, and some other substitutions, particularly those with chromosome 3B of the Czech alternative variety Česká Přesívka where a novel flowering time effect was located. Although the phenotypic and cytological analysis of substitution lines has been continually carried out during backcrossing generations, only the use of molecular markers can allow an unambiguous characterization to verify that substitutions are correct and complete. This analysis has allowed incorrect substitutions or partial substitutions to be identified and discarded. This paper summarizes the results of recent molecular checks of the substitution line collections at CRI.


1993 ◽  
Vol 85-85 (6-7) ◽  
pp. 784-792 ◽  
Author(s):  
K. M. Devos ◽  
T. Millan ◽  
M. D. Gale
Keyword(s):  

BMC Genomics ◽  
2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Rongzhi Zhang ◽  
Shuaifeng Geng ◽  
Zhengrui Qin ◽  
Zongxiang Tang ◽  
Cheng Liu ◽  
...  

2003 ◽  
Vol 16 (12) ◽  
pp. 1129-1134 ◽  
Author(s):  
John de Majnik ◽  
Francis C. Ogbonnaya ◽  
Odile Moullet ◽  
Evans S. Lagudah

Differential responses in host-nematode pathotype interactions occur in wheat lines carrying different cereal cyst nematode resistance (Cre) genes. Cre1, located on chromosome 2B, confers resistance to most European nematodes and the sole Australian pathotype, while Cre3, present on chromosome 2D, is highly resistant to the Australian patho-type and susceptible to a number of European pathotypes. Genes encoding nucleotide binding site-leucine rich repeat (NBS-LRR) proteins that cosegregate with the Cre3 locus cross hybridize to homologues whose restriction fragment length polymorphism (RFLP) patterns distinguish near-isogenic Cre1 nematode-resistant wheat lines. Genetic mapping showed that the NBS-LRR gene members that distinguished the Cre1 near-isogenic lines were located on chromosome 2BL at a locus, designated Xcsl107, that cosegregates with the Cre1 locus. A haplotype of NBS-LRR genes from the Xcsl107 locus provides a diagnostic marker for the presence of Cre1 nematode resistance in a wide collection of wheat lines and segregating families. Genetic analysis of NBS-LRR haplo-types that cosegregate with Cre1 and Cre3 resistance, together with flanking cDNA markers and other markers from homoeologous group 2 chromosomes, revealed a conserved gene order that suggests Cre1 and Cre3 are homeoloci.


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