scholarly journals Effects of Interobserver Variability on 2D and 3D CT- and MRI-Based Texture Feature Reproducibility of Cartilaginous Bone Tumors

2021 ◽  
Author(s):  
Salvatore Gitto ◽  
Renato Cuocolo ◽  
Ilaria Emili ◽  
Laura Tofanelli ◽  
Vito Chianca ◽  
...  
Keyword(s):  
Bone Tumors ◽  
Intraclass Correlation ◽  
Texture Feature ◽  
Region Of Interest ◽  
Unenhanced Ct ◽  
Unenhanced Computed Tomography ◽  
2D And 3D ◽  
Feature Stability ◽  
Ct And Mri ◽  
T2 Weighted Images

AbstractThis study aims to investigate the influence of interobserver manual segmentation variability on the reproducibility of 2D and 3D unenhanced computed tomography (CT)- and magnetic resonance imaging (MRI)-based texture analysis. Thirty patients with cartilaginous bone tumors (10 enchondromas, 10 atypical cartilaginous tumors, 10 chondrosarcomas) were retrospectively included. Three radiologists independently performed manual contour-focused segmentation on unenhanced CT and T1-weighted and T2-weighted MRI by drawing both a 2D region of interest (ROI) on the slice showing the largest tumor area and a 3D ROI including the whole tumor volume. Additionally, a marginal erosion was applied to both 2D and 3D segmentations to evaluate the influence of segmentation margins. A total of 783 and 1132 features were extracted from original and filtered 2D and 3D images, respectively. Intraclass correlation coefficient ≥ 0.75 defined feature stability. In 2D vs. 3D contour-focused segmentation, the rates of stable features were 74.71% vs. 86.57% (p < 0.001), 77.14% vs. 80.04% (p = 0.142), and 95.66% vs. 94.97% (p = 0.554) for CT and T1-weighted and T2-weighted images, respectively. Margin shrinkage did not improve 2D (p = 0.343) and performed worse than 3D (p < 0.001) contour-focused segmentation in terms of feature stability. In 2D vs. 3D contour-focused segmentation, matching stable features derived from CT and MRI were 65.8% vs. 68.7% (p = 0.191), and those derived from T1-weighted and T2-weighted images were 76.0% vs. 78.2% (p = 0.285). 2D and 3D radiomic features of cartilaginous bone tumors extracted from unenhanced CT and MRI are reproducible, although some degree of interobserver segmentation variability highlights the need for reliability analysis in future studies.

The Reliability of Measuring Early Brain Edema with Computed Tomography

2021 ◽  
Vol 17 ◽  
Author(s):  
Yi-Fang Fan ◽  
Mi Shen ◽  
Xin-Xin Wang ◽  
Xiao-Yuan Liu ◽  
Yu-Ming Peng ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Brain Edema ◽  
Early Stage ◽  
Pearson Correlation ◽  
Intraclass Correlation ◽  
Region Of Interest ◽  
High Grade Glioma ◽  
High Grade ◽  
Magnetic Resonance Imaging Mri ◽  
Ct And Mri

Background: Postoperative brain edema is a common complication in patients with high-grade glioma after craniotomy. Both computed tomography (CT) and Magnetic Resonance Imaging (MRI) are applied to diagnose brain edema. Usually, MRI is considered to be better than CT for identifying brain edema. However, MRI is not generally applied in diagnosing acute cerebral edema in the early postoperative stage. Whether CT is reliable in detecting postoperative brain edema in the early stage is unknown. Objective: To investigate the agreement and correlation between CT and MRI for measuring early postoperative brain edema. Methods: Patients with high-grade glioma who underwent craniotomy in Beijing Tiantan hospital from January 2017 to October 2018 were retrospectively analyzed. The region of interest and operative cavity were manually outlined, and the volume of postoperative brain edema was measured on CT and MRI. Pearson correlation testing and the intraclass correlation coefficient (ICC) were used to evaluate the association and agreement between CT and MRI for detecting the volume of postoperative brain edema. Results: Twenty patients were included in this study. The interrater agreement was perfect for detecting brain edema (CT: κ=1, ICC=0.977, P<0.001; MRI: κ=0.866, ICC=0.963, P<0.001). A significant positive correlation and excellent consistency between CT and MRI were found for measuring the volume of brain edema (rater 1: r=0.97, ICC=0.934, P<0.001; rater 2: r=0.97, ICC=0.957, P<0.001). Conclusion: Substantial comparability between CT and MRI is demonstrated for detecting postoperative brain edema. It is reliable to use CT for measuring brain edema volume in the early stage after surgery.

scholarly journals Unenhanced CT imaging is highly sensitive to exclude pheochromocytoma: a multicenter study

2018 ◽  
Vol 178 (5) ◽  
pp. 431-437 ◽  
Author(s):  
Edward Buitenwerf ◽  
Tijmen Korteweg ◽  
Anneke Visser ◽  
Charlotte M S C Haag ◽  
Richard A Feelders ◽  
...  
Keyword(s):  
Multicenter Study ◽  
Intraclass Correlation ◽  
Region Of Interest ◽  
Adrenal Incidentaloma ◽  
Threshold Value ◽  
Adrenal Tumors ◽  
Tumor Diameter ◽  
Unenhanced Ct ◽  
Attenuation Value ◽  
Biochemical Testing

BackgroundA substantial proportion of all pheochromocytomas is currently detected during the evaluation of an adrenal incidentaloma. Recently, it has been suggested that biochemical testing to rule out pheochromocytoma is unnecessary in case of an adrenal incidentaloma with an unenhanced attenuation value ≤10 Hounsfield Units (HU) at computed tomography (CT).ObjectivesWe aimed to determine the sensitivity of the 10 HU threshold value to exclude a pheochromocytoma.MethodsRetrospective multicenter study with systematic reassessment of preoperative unenhanced CT scans performed in patients in whom a histopathologically proven pheochromocytoma had been diagnosed. Unenhanced attenuation values were determined independently by two experienced radiologists. Sensitivity of the 10 HU threshold was calculated, and interobserver consistency was assessed using the intraclass correlation coefficient (ICC).Results214 patients were identified harboring a total number of 222 pheochromocytomas. Maximum tumor diameter was 51 (39–74) mm. The mean attenuation value within the region of interest was 36 ± 10 HU. Only one pheochromocytoma demonstrated an attenuation value ≤10 HU, resulting in a sensitivity of 99.6% (95% CI: 97.5–99.9). ICC was 0.81 (95% CI: 0.75–0.86) with a standard error of measurement of 7.3 HU between observers.ConclusionThe likelihood of a pheochromocytoma with an unenhanced attenuation value ≤10 HU on CT is very low. The interobserver consistency in attenuation measurement is excellent. Our study supports the recommendation that in patients with an adrenal incidentaloma biochemical testing for ruling out pheochromocytoma is only indicated in adrenal tumors with an unenhanced attenuation value >10 HU.

scholarly journals Comparing the Tibial Tuberosity–Trochlear Groove Distance Between CT and MRI in Skeletally Immature Patients With and Without Patellar Instability

2021 ◽  
Vol 9 (1) ◽  
pp. 232596712097366
Author(s):  
Zhen-Zhen Dai ◽  
Lin Sha ◽  
Zi-Ming Zhang ◽  
Zhen-Peng Liang ◽  
Hao Li ◽  
...  
Keyword(s):  
Patellar Instability ◽  
Intraclass Correlation ◽  
Mean Difference ◽  
Tibial Tubercle ◽  
Control Group ◽  
Trochlear Groove ◽  
Skeletally Immature ◽  
Bony Landmarks ◽  
The Difference ◽  
Ct And Mri

Background: The tibial tubercle–trochlear groove (TT-TG) distance was originally described for computed tomography (CT), but it has been measured on magnetic resonance imaging (MRI) in patients with patellar instability (PI). Whether the TT-TG measured on CT versus MRI can be considered equivalent in skeletally immature children remains unclear. Purpose: To investigate in skeletally immature patients (1) the effects of CT versus MRI imaging modality and cartilage versus bony landmarks on consistency of TT-TG measurement, (2) the difference between CT and MRI measurements of the TT-TG, and (3) the difference in TT-TG between patients with and without PI. Study Design: Cross-sectional study; Level of evidence, 3. Methods: We retrospectively identified 24 skeletally immature patients with PI and 24 patients with other knee disorders or injury but without PI. The bony and cartilaginous TT-TG distances on CT and MRI were measured by 2 researchers, and related clinical data were collected. The interrater, interperiod (bony vs cartilaginous), and intermethod (CT vs MRI) reliabilities of TT-TG measurement were assessed with intraclass correlation coefficients. Results: The 48 study patients (19 boys, 29 girls) had a mean age of 11.3 years (range, 7-14 years). TT-TG measurements had excellent interrater reliability and good or excellent interperiod reliability but fair or poor intermethod reliability. TT-TG distance was greater on CT versus MRI (mean difference, 4.07 mm; 95% CI, 2.6-5.5 mm), and cartilaginous distance was greater than bony distance (mean difference, 2.3 mm; 95% CI, 0.79-3.8 mm). The TT-TG measured on CT was found to increase with the femoral width. Patients in the PI group had increased TT-TG distance compared with those in the control group, regardless of landmarks or modality used ( P > .05 for all). Conclusion: For skeletally immature patients, the TT-TG distance could be evaluated on MRI, regardless of whether cartilage or bony landmarks were used. Its value could not be interchanged with CT according to our results; however, further research on this topic is needed.

Comparing Reliability Between 3D Imaging And 2D Photography For External Nasal Anthropometry

2021 ◽  
Author(s):  
Yoon-Soo Seo ◽  
Ki-Hun Jo ◽  
Jun-Sang CHA ◽  
Joo-Yeon Kim ◽  
Jae-Hwan Kwon
Keyword(s):  
3D Imaging ◽  
Intraclass Correlation ◽  
Digital Camera ◽  
Angular Parameter ◽  
Good Reliability ◽  
Rater Reliability ◽  
3D Images ◽  
Imaging Result ◽  
External Nose ◽  
2D And 3D

Abstract Background: This study investigates and compare the reliability and reproducibility of two facial anthropometric methods about external nasal angles, 3D imaging and conventional 2D photography. Methods: 2D photograph images and 3D images about external nose of 30 volunteers were taken using digital camera and Morpheus 3D scanner. To evaluate intra-rater reliability, each images were taken over two different days for each subject by the same researcher. To evaluate inter-rater reliability, another researcher took each images for each subject on the first day. The reliability of each method for measuring 4 external nasal angle is obtained using intraclass correlation coefficient (ICC) and compared.Results: Inter-rater and intra-rater reliability of both 3D imaging and 2D photography had excellent agreement in all 4 nasal angles. In the nasofacial angular parameter, Inter-rater ICC, 2D photography was significantly higher than 3D imaging. Result of intra-rater ICC also showed both 3D imaging and 2D photography had good reliability in all 4 nasal angles. Similar to those of inter-rater ICC, nasofacial angular parameter showed statistically significant differences between 3D imaging and 2D photography.Conclusion: In terms of reliability, both 2D and 3D showed appropriate anthropometric results and considering its own advantage, each methods can be used complementarily.

scholarly journals Phasor based single-molecule localization microscopy in 3D (pSMLM-3D): an algorithm for MHz localization rates using standard CPUs

2017 ◽  
Author(s):  
Koen J.A. Martens ◽  
Arjen N. Bader ◽  
Sander Baas ◽  
Bernd Rieger ◽  
Johannes Hohlbein
Keyword(s):  
Single Molecule ◽  
Iterative Algorithms ◽  
Region Of Interest ◽  
Depth Information ◽  
Localization Algorithm ◽  
Two Phase ◽  
Model Free ◽  
Spread Function ◽  
2D And 3D ◽  
Single Molecule Localization Microscopy

AbstractWe present a fast and model-free 2D and 3D single-molecule localization algorithm that allows more than 3 million localizations per second on a standard multi-core CPU with localization accuracies in line with the most accurate algorithms currently available. Our algorithm converts the region of interest around a point spread function (PSF) to two phase vectors (phasors) by calculating the first Fourier coefficients in both x- and y-direction. The angles of these phasors are used to localize the center of the single fluorescent emitter, and the ratio of the magnitudes of the two phasors is a measure for astigmatism, which can be used to obtain depth information (z-direction). Our approach can be used both as a stand-alone algorithm for maximizing localization speed and as a first estimator for more time consuming iterative algorithms.

Measurement of Medial Tibial Eminence Dimensions for the Clinical Evaluation of ACL-Injured Knees: A Comparison between CT and MRI

2021 ◽  
Author(s):  
Hayk Stepanyan ◽  
Jaron Nazaroff ◽  
Ngoc Le ◽  
Robert Parker ◽  
Toshimi Tando ◽  
...  
Keyword(s):  
Correlation Coefficient ◽  
Cruciate Ligament ◽  
Intraclass Correlation ◽  
Acl Injuries ◽  
Intraarticular Fracture ◽  
Tibial Eminence ◽  
Picture Archiving And Communication ◽  
Width Measurements ◽  
Mri Measurements ◽  
Ct And Mri

AbstractAnterior cruciate ligament (ACL) injuries commonly lead to translational and rotational tibiofemoral instability. The morphology of the medial tibial eminence (MTE) has received increased attention regarding its role in tibiofemoral stability in ACL-injured knees. Therefore, quantification of MTE dimensions on clinical imaging may help clinicians predict knee stability after ACL injury. Although magnetic resonance imaging (MRI) is routinely obtained in patients with ACL injuries, whether the dimensions of the MTE can be accurate quantified on MRI is unknown. The purpose of this study was to assess the degree of correlation between measurements of MTE height and width on computed tomography (CT) versus MRI. An institutional picture archiving and communication system imaging database was used to identify patients aged between 15 and 60 years who received concurrent MRI and CT of the same knee within a 1-year interval. Knees with significant arthrosis, deformity, intraarticular fracture, or hardware-related artifact that obscured visualization of the MTE were excluded. Mean differences and interstudy agreement between CT and MRI MTE measurements were compared using concordance correlation coefficient (r c) and Bland–Altman analysis. A total of 41 knees in 38 patients (mean age, 37 years; 82% male) were analyzed. Interrater reliability for CT and MRI measurements was high (intraclass correlation coefficient = 0.740–0.954). On coronal CT and MRI, mean MTE height measurements were 10.4 ± 1.9 and 10.4 ± 1.8 mm, respectively; mean MTE width measurements were 14.6 ± 3.6 and 14.2 ± 3.0 mm, respectively. On sagittal CT and MRI, mean MTE height measurements were 11.6 ± 1.7 and 11.7 ± 1.7 mm, respectively; mean MTE width measurements were 36.5 ± 4.8 and 36.2 ± 5.0 mm, respectively. Good agreement was observed between CT and MRI measurements of MTE height and width on coronal and sagittal planes (r c = 0.947–0.969). Measurements of MTE height and width were similar on MRI relative to CT on both coronal and sagittal planes. MRI may be suitable for characterizing the dimensions of the MTE when clinically evaluating patients with ACL injuries, potentially allowing for individualized patient care.

scholarly journals A Case-control Study of 3D versus 2D Weight Bearing CT Measurements of the M1-M2 Intermetatarsal Angle in Hallux Valgus

2018 ◽  
Vol 3 (3) ◽  
pp. 2473011418S0032
Author(s):  
Francois Lintz ◽  
Arne Burssens ◽  
Alesio Bernasconi ◽  
Martin O’Malley ◽  
Rémi Raclot ◽  
...  
Keyword(s):  
Hallux Valgus ◽  
Weight Bearing ◽  
Intraclass Correlation ◽  
Intraobserver Reliability ◽  
3D Images ◽  
Intermetatarsal Angle ◽  
Mean Values ◽  
3D Measurements ◽  
2D And 3D ◽  
2D Images

Category: Midfoot/Forefoot Introduction/Purpose: Surgical planning based on angular measurements obtained on conventional radiographs is challenging due to perspective distortion and operator bias. Novel weightbearing CT (WBCT) three-dimensional (3D) measurements using coordinate systems may represent a more reliable and accurate evaluation of this 3D deformity. The objective of this study was to compare the M1-M2 intermetatarsal angle (IMA) obtained manually on WBCT digitally reconstructed 2D radiographs versus a set of coordinates from the full 3D dataset, in patients with hallux valgus (HV) deformity and in healthy controls. We hypothesised that the 3D measurements would be more reliably obtained, demonstrating different values when compared to 2D radiographic measurements. Methods: In this multicenter retrospective comparative study, 83 feet that underwent WBCT of the foot were included (41 HV: mean age 59, 81% female, 42 controls: mean age 52, 80% female). Datasets were analysed by three independent trained foot and ankle surgeons using the same protocol. Coordinates in three planes (x, y, z) of four different landmark points were harvested: center of the heads and midpoint of the proximal metaphysis of the 1st and 2nd metatarsal. The IMA measurements were then performed in reconstructed radiographic images (DRR-IMA). The data collected was then analyzed by a single 4th independent and blinded investigator who calculated the 3D angle (3D-IMA) and its projection on the weightbearing plane (2D-IMA). Intra-observer realiability was assessed by Pearson/Spearman’s correlation. Intermethod correlation was evaluated by intraclass correlation coefficient (ICC). Mean values for measures were comparared by One-way ANOVA. P-values of less than 0.05 were considered significant. Results: Intraobserver reliability was excellent for radiographic DRR-IMA (0.95) and 3D coordinates assessment (0.99). Intermethod correlation between the three different imaging modalities (DDR, 2D and 3D), considering bias and interactions, were respectively 0.71 and 0.51 in control and HV patients. IMA measurements were found to be similar when measured in DRR, 2D and 3D WBCT images, for both controls and HV patients. Mean values and confidence intervals (CI) for controls were 8.8 degrees (CI, 7.9-9.7) in DDR images, 9.8 degrees (CI, 8.7-10.9) in 2D images and 10.6 degrees (CI, 9.5-11.8) in 3D images. When compared to controls, HV patients demonstraded significantly increased IMA (p<0.05): 13.06 degrees (CI, 11.8-14.3) in DDR images, 12.1 degrees (CI, 10.8-13.3) in 2D images and 13.3 degrees (CI, 12.3-14.3) in 3D images. Conclusion: We found that similar values for IMA were measured in 2D reconstructed radiographs, WBCT 3D and 2D projected images. When compared to controls, HV patients were found to have increased IMA in all three different imaging types used (DDR, 2D and 3D). Intermethod correlation was higher for IMA performed in controls. Intraobserver reliability was excellent for both radiographic IMA measurements and WBCT 3D coordinates. Our study is the first study to evaluate measurements of the 3D-IMA in HV and control patients. Further investigations are required before guidelines for its clinical use can be formulated.

scholarly journals Scan–rescan and inter-vendor reproducibility of neurite orientation dispersion and density imaging metrics

2019 ◽  
Vol 62 (4) ◽  
pp. 483-494
Author(s):  
Christina Andica ◽  
Koji Kamagata ◽  
Takuya Hayashi ◽  
Akifumi Hagiwara ◽  
Wataru Uchida ◽  
...  
Keyword(s):  
Gray Matter ◽  
Healthy Subjects ◽  
Volume Fraction ◽  
Diffusion Tensor ◽  
Intraclass Correlation ◽  
Region Of Interest ◽  
Brain Regions ◽  
Automatic Extraction ◽  
Dispersion Index ◽  
Diffusion Tensor Imaging Dti

Abstract Purpose The reproducibility of neurite orientation dispersion and density imaging (NODDI) metrics in the human brain has not been explored across different magnetic resonance (MR) scanners from different vendors. This study aimed to evaluate the scan–rescan and inter-vendor reproducibility of NODDI metrics in white and gray matter of healthy subjects using two 3-T MR scanners from two vendors. Methods Ten healthy subjects (7 males; mean age 30 ± 7 years, range 23–37 years) were included in the study. Whole-brain diffusion-weighted imaging was performed with b-values of 1000 and 2000 s/mm2 using two 3-T MR scanners from two different vendors. Automatic extraction of the region of interest was performed to obtain NODDI metrics for whole and localized areas of white and gray matter. The coefficient of variation (CoV) and intraclass correlation coefficient (ICC) were calculated to assess the scan–rescan and inter-vendor reproducibilities of NODDI metrics. Results The scan–rescan and inter-vendor reproducibility of NODDI metrics (intracellular volume fraction and orientation dispersion index) were comparable with those of diffusion tensor imaging (DTI) metrics. However, the inter-vendor reproducibilities of NODDI (CoV = 2.3–14%) were lower than the scan–rescan reproducibility (CoV: scanner A = 0.8–3.8%; scanner B = 0.8–2.6%). Compared with the finding of DTI metrics, the reproducibility of NODDI metrics was lower in white matter and higher in gray matter. Conclusion The lower inter-vendor reproducibility of NODDI in some brain regions indicates that data acquired from different MRI scanners should be carefully interpreted.

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