Identification of QTLs for seed quality traits in rapeseed (Brassica napus L.) using recombinant inbred lines (RILs)

Euphytica ◽  
2016 ◽  
Vol 210 (1) ◽  
pp. 1-16 ◽  
Author(s):  
Xian-Qun Huang ◽  
Tuan Huang ◽  
Guo-Zuo Hou ◽  
Li Li ◽  
Yan Hou ◽  
...  
2004 ◽  
Vol 54 (4) ◽  
pp. 399-407 ◽  
Author(s):  
Satoshi Watanabe ◽  
Teuku Tajuddin ◽  
Naoki Yamanaka ◽  
Masaki Hayashi ◽  
Kyuya Harada

Genome ◽  
2008 ◽  
Vol 51 (8) ◽  
pp. 599-615 ◽  
Author(s):  
A. Ebrahimi ◽  
P. Maury ◽  
M. Berger ◽  
S. Poormohammad Kiani ◽  
A. Nabipour ◽  
...  

The objectives of the present research were to determine the effects of water stress on seed-quality traits and to map QTLs controlling the studied traits under two different water treatments in a population of sunflower recombinant inbred lines (RILs). Two experiments were conducted in greenhouse and field conditions, each with well-watered and water-stressed treatments. The experiments consisted of a split-plot design (water treatment and RIL) with three blocks. Analyses of variance showed significant variation among genotypes, and a water treatment × genotype interaction was also observed for most of the traits. Two to 15 QTLs were found, depending on trait and growth conditions, and the percentage of phenotypic variance explained by the QTLs ranged from 5% to 31%. Several QTLs for oil content overlapped with QTLs for palmitic and stearic acid contents in all four conditions. An overlapping region on linkage group 3 (QTLs 2.OC.3.1 and 4.SA.3.1) was linked to an SSR marker (ORS657). A principal component analysis was performed on four fatty acid traits. Two principal components, P1 and P2, were used for QTL analysis. This method improved the ability to identify chromosomal regions affecting the fatty acids. We also detected the principal-component QTLs that did not overlap with the fatty acid QTLs. The results highlight genomic regions of interest in marker-based breeding programmes for increasing oil content in sunflower.


2015 ◽  
Vol 35 (6) ◽  
Author(s):  
Humberto A. Gajardo ◽  
Benjamin Wittkop ◽  
Braulio Soto-Cerda ◽  
Erin E. Higgins ◽  
Isobel A. P. Parkin ◽  
...  

Euphytica ◽  
2021 ◽  
Vol 217 (9) ◽  
Author(s):  
Asena Akkose Baytar ◽  
Ceng Peynircioğlu ◽  
Volkan Sezener ◽  
Anne Frary ◽  
Sami Doğanlar

2020 ◽  
Vol 100 (4) ◽  
pp. 425-434
Author(s):  
Yarui Su ◽  
Pingan Liao ◽  
Danyang Song ◽  
Shiquan Huang ◽  
Jie He ◽  
...  

Grain protein content (GPC) is an important nutritional quality trait of wheat. Aegilops tauschii Coss. is a progenitor of common wheat and has been shown to have high GPC. The objective of this study was to identify quantitative trait loci (QTL) for GPC using A. tauschii–Triticum aestivum L. recombinant lines. An advanced BC2F6 population (112 lines) containing A. tauschii segments was developed using synthetic octaploid wheat (hexaploid wheat Zhoumai 18 × A. tauschii T093), which displayed significant phenotype variances. Two quality traits, GPC and wet gluten, and four yield-related traits, thousand kernel weight, spikelet number per plant, grain number per spike, and grain weight per spike, were evaluated. The results show that the mean GPCs of these lines were significantly higher than those of Zhoumai 18. Correlation and mapping analyses indicated that quality traits were weakly negatively correlated with yield traits. Furthermore, 16 A. tauschii-derived QTL for GPC were detected in the recombinant inbred lines, and four stable QTL that have no significant negative effects on yield and are located within the same marker interval were detected in both environments. Additionally, high-protein, high-yield lines 150228 and 150368 with stable QTL were obtained, and both can be directly utilised for fine mapping of the GPC genes and molecular marker–assisted selection to achieve synergistic improvement of wheat yield and protein content.


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